Task 99996310

Name ebola_RdRp_v1_sidock_00721155_r3_s-24.0_0
Workunit 70426635
Created 14 Mar 2026, 13:23:58 UTC
Sent 14 Mar 2026, 18:25:34 UTC
Report deadline 18 Mar 2026, 18:25:34 UTC
Received 16 Mar 2026, 5:27:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54588
Run time 8 hours 21 min 40 sec
CPU time 8 hours 21 min 32 sec
Validate state Valid
Credit 579.68
Device peak FLOPS 9.84 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.70 MB
Peak swap size 245.69 MB
Peak disk usage 20.32 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:02:36 (644853): wrapper (7.17.26016): starting
21:02:37 (644853): wrapper (7.17.26016): starting
21:02:37 (644853): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5785d7a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c995f245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7c995f29eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7c995f24527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7c995f2288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7c995f2297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7c995f2a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7c995f2ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7c995f2addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5785d7a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5785d7a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c995f245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c995f2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c995f2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c995f32975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5785d7a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5785d7a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c995f22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c995f22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5785d7a1aa3a]

Exiting...
21:00:02 (108155): wrapper (7.17.26016): starting
21:00:02 (108155): wrapper (7.17.26016): starting
21:00:02 (108155): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:27:21 (108155): cmdock exited; CPU time 12434.765033
00:27:21 (108155): called boinc_finish(0)

</stderr_txt>
]]>


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