Task 99992476

Name ebola_RdRp_v1_sidock_00720201_r1_s-24.0_0
Workunit 70422817
Created 14 Mar 2026, 13:20:45 UTC
Sent 14 Mar 2026, 14:51:12 UTC
Report deadline 18 Mar 2026, 14:51:12 UTC
Received 15 Mar 2026, 16:27:38 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 83882
Run time 6 sec
CPU time 4 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 3.88 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 30.88 MB
Peak swap size 41.63 MB
Peak disk usage 20.17 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:51:31 (11993): wrapper (7.17.26016): starting
16:51:31 (11993): wrapper (7.17.26016): starting
16:51:31 (11993): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x60aa87c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x789bf43a7330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x789bf4400b2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x789bf43a727e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x789bf438a8ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x789bf438b7b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x789bf440aff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x789bf440d38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x789bf440fdce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x60aa87c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x60aa87c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x789bf43a7330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x789bf444eadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x789bf445ba27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x789bf448b75c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x60aa87c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x60aa87c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x789bf438c1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x789bf438c28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x60aa87c1aa3a]

Exiting...
17:27:03 (9275): wrapper (7.17.26016): starting
17:27:03 (9275): wrapper (7.17.26016): starting
17:27:03 (9275): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:27:08 (9275): cmdock exited; CPU time 4.541812
17:27:08 (9275): called boinc_finish(0)

</stderr_txt>
]]>


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