Task 99991855

Name ebola_RdRp_v1_sidock_00720044_r2_s-24.0_0
Workunit 70422190
Created 14 Mar 2026, 13:20:16 UTC
Sent 14 Mar 2026, 14:13:25 UTC
Report deadline 18 Mar 2026, 14:13:25 UTC
Received 18 Mar 2026, 6:06:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83096
Run time 8 hours 0 min 6 sec
CPU time 7 hours 57 min 9 sec
Validate state Valid
Credit 501.73
Device peak FLOPS 8.26 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.49 MB
Peak swap size 245.69 MB
Peak disk usage 20.26 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:32:26 (82808): wrapper (7.17.26016): starting
07:32:26 (82808): wrapper (7.17.26016): starting
07:32:26 (82808): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:11:38 (106934): wrapper (7.17.26016): starting
12:11:38 (106934): wrapper (7.17.26016): starting
12:11:38 (106934): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:12:53 (112265): wrapper (7.17.26016): starting
13:12:53 (112265): wrapper (7.17.26016): starting
13:12:53 (112265): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d629023ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71280d845330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x71280d8add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d629025c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d629027b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71280d845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x71280d8ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x71280d8f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71280d92975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d6290251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d629021e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71280d82a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71280d82a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d629021aa3a]

Exiting...
18:37:12 (1992): wrapper (7.17.26016): starting
18:37:12 (1992): wrapper (7.17.26016): starting
18:37:12 (1992): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:06:00 (1992): cmdock exited; CPU time 16025.265438
23:06:00 (1992): called boinc_finish(0)

</stderr_txt>
]]>


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