Task 99977254

Name ebola_RdRp_v1_sidock_00718397_r1_s-24.0_0
Workunit 70415601
Created 11 Mar 2026, 1:11:03 UTC
Sent 14 Mar 2026, 2:18:05 UTC
Report deadline 18 Mar 2026, 2:18:05 UTC
Received 16 Mar 2026, 19:06:44 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 193 (0x000000C1) EXIT_SIGNAL
Computer ID 78237
Run time 6 hours 28 min 10 sec
CPU time 6 hours 27 min 58 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.37 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.88 MB
Peak swap size 245.23 MB
Peak disk usage 20.33 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<message>
process exited with code 193 (0xc1, -63)</message>
<stderr_txt>
04:57:45 (3338530): wrapper (7.17.26016): starting
04:57:45 (3338530): wrapper (7.17.26016): starting
04:57:45 (3338530): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:30:04 (3813432): wrapper (7.17.26016): starting
15:30:04 (3813432): wrapper (7.17.26016): starting
15:30:04 (3813432): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55689d83ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7f9860f799e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7f9860fd53fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55689d85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55689d87b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7f9860f799e0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aed2)[0x55689d83aed2]
/usr/lib64/libc.so.6(+0x369e0)[0x7f9860f799e0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f9861009885]
/usr/lib64/libc.so.6(nanosleep+0x13)[0x7f986100e0e3]
/usr/lib64/libc.so.6(usleep+0x35)[0x7f98610383d5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55689d851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55689d81e784]
/usr/lib64/libc.so.6(+0x23737)[0x7f9860f66737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7f9860f667f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55689d81aa3a]

Exiting...
20:33:06 (3398520): wrapper (7.17.26016): starting
20:33:06 (3398520): wrapper (7.17.26016): starting
20:33:06 (3398520): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:35:47 (3400917): wrapper (7.17.26016): starting
20:35:47 (3400917): wrapper (7.17.26016): starting
20:35:47 (3400917): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56040503ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7f686091c9e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7f68609783fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56040505c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56040507b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7f686091c9e0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f68609ac885]
/usr/lib64/libc.so.6(nanosleep+0x13)[0x7f68609b10e3]
/usr/lib64/libc.so.6(usleep+0x35)[0x7f68609db3d5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x560405051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56040501e784]
/usr/lib64/libc.so.6(+0x23737)[0x7f6860909737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7f68609097f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56040501aa3a]

Exiting...
09:31:29 (885558): wrapper (7.17.26016): starting
09:31:29 (885558): wrapper (7.17.26016): starting
09:31:29 (885558): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:33:11 (887978): wrapper (7.17.26016): starting
09:33:11 (887978): wrapper (7.17.26016): starting
09:33:11 (887978): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:34:28 (888698): wrapper (7.17.26016): starting
09:34:28 (888698): wrapper (7.17.26016): starting
09:34:28 (888698): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5625ba23ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7facc8bc39e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7facc8c1f3fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5625ba25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5625ba27b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7facc8bc39e0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7facc8c53885]
/usr/lib64/libc.so.6(nanosleep+0x13)[0x7facc8c580e3]
/usr/lib64/libc.so.6(usleep+0x35)[0x7facc8c823d5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5625ba251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5625ba21e784]
/usr/lib64/libc.so.6(+0x23737)[0x7facc8bb0737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7facc8bb07f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5625ba21aa3a]

Exiting...
10:12:12 (962351): wrapper (7.17.26016): starting
10:12:12 (962351): wrapper (7.17.26016): starting
10:12:12 (962351): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (12 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55acff63ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7fb650b2a9e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7fb650b863fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55acff65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55acff67b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7fb650b2a9e0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a0b)[0x55acff651a0b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9f)[0x55acff651a9f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55acff61e784]
/usr/lib64/libc.so.6(+0x23737)[0x7fb650b17737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7fb650b177f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55acff61aa3a]

Exiting...
10:28:03 (989728): wrapper (7.17.26016): starting
10:28:03 (989728): wrapper (7.17.26016): starting
10:28:03 (989728): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:29:34 (991465): wrapper (7.17.26016): starting
10:29:35 (991465): wrapper (7.17.26016): starting
10:29:35 (991465): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5574e983ff8c]
/usr/lib64/libc.so.6(+0x369e0)[0x7f325d7979e0]
/usr/lib64/libc.so.6(__libc_free+0x1c)[0x7f325d7f33fc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5574e985c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5574e987b8e4]
/usr/lib64/libc.so.6(+0x369e0)[0x7f325d7979e0]
/usr/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f325d827885]
/usr/lib64/libc.so.6(nanosleep+0x13)[0x7f325d82c0e3]
/usr/lib64/libc.so.6(usleep+0x35)[0x7f325d8563d5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5574e9851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5574e981e784]
/usr/lib64/libc.so.6(+0x23737)[0x7f325d784737]
/usr/lib64/libc.so.6(__libc_start_main+0x85)[0x7f325d7847f5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5574e981aa3a]

Exiting...

</stderr_txt>
]]>


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