Task 99875949

Name ebola_RdRp_v1_sidock_00695319_r3_s-24.0_0
Workunit 70323291
Created 6 Mar 2026, 11:11:25 UTC
Sent 9 Mar 2026, 16:12:36 UTC
Report deadline 13 Mar 2026, 16:12:36 UTC
Received 16 Mar 2026, 16:24:47 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 79717
Run time 2 hours 34 min 29 sec
CPU time 2 hours 34 min 29 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 6.60 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.87 MB
Peak swap size 246.00 MB
Peak disk usage 20.08 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:57:27 (4400): wrapper (7.17.26016): starting
13:57:28 (4400): wrapper (7.17.26016): starting
13:57:28 (4400): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:33:26 (7992): wrapper (7.17.26016): starting
17:33:26 (7992): wrapper (7.17.26016): starting
17:33:26 (7992): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62ad42c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7610c1e45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7610c1eadd75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62ad42c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62ad42c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7610c1e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7610c1eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7610c1ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7610c1f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62ad42c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62ad42c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7610c1e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7610c1e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62ad42c1aa3a]

Exiting...
11:42:53 (2223): wrapper (7.17.26016): starting
11:42:53 (2223): wrapper (7.17.26016): starting
11:42:53 (2223): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59cf9103ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f085aa45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7f085aaadd75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59cf9105c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59cf9107b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f085aa45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7f085aaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f085aaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x7f085ab0ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x59cf91051a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59cf9101e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f085aa2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f085aa2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59cf9101aa3a]

Exiting...
10:28:04 (2250): wrapper (7.17.26016): starting
10:28:04 (2250): wrapper (7.17.26016): starting
10:28:04 (2250): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5cf068c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x745e2a645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x745e2a6add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5cf068c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5cf068c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x745e2a645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x745e2a6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x745e2a6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x745e2a72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5cf068c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5cf068c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x745e2a62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x745e2a62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5cf068c1aa3a]

Exiting...
13:14:45 (2490): wrapper (7.17.26016): starting
13:14:45 (2490): wrapper (7.17.26016): starting
13:14:45 (2490): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62a50d43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7298e7645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7298e76add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62a50d45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62a50d47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7298e7645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7298e76ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7298e76f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7298e772975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62a50d451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62a50d41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7298e762a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7298e762a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62a50d41aa3a]

Exiting...
17:23:29 (2271): wrapper (7.17.26016): starting
17:23:30 (2271): wrapper (7.17.26016): starting
17:23:30 (2271): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:24:25 (2271): cmdock exited; CPU time 23.059300
17:24:25 (2271): called boinc_finish(0)

</stderr_txt>
]]>


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