Task 98876188

Name ebola_RdRp_v1_sidock_00468616_r3_s-24.0_0
Workunit 69416479
Created 21 Jan 2026, 2:02:49 UTC
Sent 22 Jan 2026, 12:32:45 UTC
Report deadline 26 Jan 2026, 12:32:45 UTC
Received 23 Jan 2026, 2:41:05 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 1 hours 52 min 16 sec
CPU time 1 hours 52 min 2 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.62 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.10 MB
Peak swap size 246.97 MB
Peak disk usage 20.21 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:40:01 (487544): wrapper (7.17.26016): starting
06:40:01 (487544): wrapper (7.17.26016): starting
06:40:01 (487544): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5fceeee3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7bc64f845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7bc64f89eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7bc64f84527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7bc64f8288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7bc64f8297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7bc64f8a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7bc64f8ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7bc64f8addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5fceeee5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5fceeee7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7bc64f845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7bc64f8ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7bc64f8f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7bc64f92975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5fceeee51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5fceeee1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7bc64f82a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7bc64f82a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5fceeee1aa3a]

Exiting...
09:35:03 (508828): wrapper (7.17.26016): starting
09:35:03 (508828): wrapper (7.17.26016): starting
09:35:03 (508828): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:24:16 (2463): wrapper (7.17.26016): starting
20:24:16 (2463): wrapper (7.17.26016): starting
20:24:16 (2463): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:40:21 (2486): wrapper (7.17.26016): starting
20:40:21 (2486): wrapper (7.17.26016): starting
20:40:21 (2486): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:40:26 (2486): cmdock exited; CPU time 4.246522
20:40:26 (2486): called boinc_finish(0)

</stderr_txt>
]]>


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