Task 98788873

Name	ebola_RdRp_v1_sidock_00448494_r4_s-24.0_0
Workunit	69335992
Created	18 Jan 2026, 5:10:15 UTC
Sent	19 Jan 2026, 6:39:21 UTC
Report deadline	23 Jan 2026, 6:39:21 UTC
Received	23 Jan 2026, 9:00:35 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82763
Run time	1 days 12 hours 3 min 1 sec
CPU time	1 days 11 hours 52 min 56 sec
Validate state	Valid
Credit	285.29
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	237.83 MB
Peak swap size	244.76 MB
Peak disk usage	20.22 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:39:27 (7616): wrapper (7.17.26016): starting
07:39:28 (7616): wrapper (7.17.26016): starting
07:39:28 (7616): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:46:22 (1438): wrapper (7.17.26016): starting
07:46:22 (1438): wrapper (7.17.26016): starting
07:46:22 (1438): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:43:23 (1431): wrapper (7.17.26016): starting
17:43:23 (1431): wrapper (7.17.26016): starting
17:43:23 (1431): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55a9e443ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f47fa6a1df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f47fa705262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55a9e445c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55a9e447b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f47fa6a1df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f47fa6fc9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f47fa6f1668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f47fa73df7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f47fa749393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f47fa772373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55a9e4451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55a9e441e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f47fa68bca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f47fa68bd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55a9e441aa3a]

Exiting...
19:36:55 (1335): wrapper (7.17.26016): starting
19:36:55 (1335): wrapper (7.17.26016): starting
19:36:55 (1335): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55a5ee03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f314d531df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f314d595262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55a5ee05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55a5ee07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f314d531df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f314d58c9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f314d581668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f314d5cdf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f314d5d9393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f314d602373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55a5ee051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55a5ee01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f314d51bca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f314d51bd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55a5ee01aa3a]

Exiting...
21:46:33 (1353): wrapper (7.17.26016): starting
21:46:33 (1353): wrapper (7.17.26016): starting
21:46:33 (1353): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55781d63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f15b5f84df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f15b5fe8262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55781d65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55781d67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f15b5f84df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f15b5fdf9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f15b5fd4668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f15b6020f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f15b602c393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f15b6055373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55781d651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55781d61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f15b5f6eca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f15b5f6ed65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55781d61aa3a]

Exiting...
07:18:58 (1405): wrapper (7.17.26016): starting
07:18:58 (1405): wrapper (7.17.26016): starting
07:18:58 (1405): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55bfb923ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f18aa1a5df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f18aa209262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55bfb925c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55bfb927b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f18aa1a5df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f18aa2009ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f18aa1f5668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f18aa241f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f18aa24d393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f18aa276373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55bfb9251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55bfb921e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f18aa18fca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f18aa18fd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55bfb921aa3a]

Exiting...
08:02:00 (1348): wrapper (7.17.26016): starting
08:02:00 (1348): wrapper (7.17.26016): starting
08:02:00 (1348): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55eec183ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7feff5f91df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7feff5ff5262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55eec185c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55eec187b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7feff5f91df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7feff5fec9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7feff5fe1668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7feff602df7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7feff6039393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7feff6062373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55eec1851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55eec181e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7feff5f7bca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7feff5f7bd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55eec181aa3a]

Exiting...
07:05:17 (1406): wrapper (7.17.26016): starting
07:05:17 (1406): wrapper (7.17.26016): starting
07:05:17 (1406): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/12/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:00:25 (1406): cmdock exited; CPU time 10476.822378
10:00:25 (1406): called boinc_finish(0)

</stderr_txt>
]]>