Task 98788872

Name	ebola_RdRp_v1_sidock_00448510_r3_s-24.0_0
Workunit	69336055
Created	18 Jan 2026, 5:10:15 UTC
Sent	19 Jan 2026, 6:39:20 UTC
Report deadline	23 Jan 2026, 6:39:20 UTC
Received	23 Jan 2026, 8:12:55 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82763
Run time	1 days 11 hours 7 min 45 sec
CPU time	1 days 10 hours 57 min 19 sec
Validate state	Valid
Credit	278.62
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	238.45 MB
Peak swap size	245.62 MB
Peak disk usage	20.21 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:39:26 (7595): wrapper (7.17.26016): starting
07:39:26 (7595): wrapper (7.17.26016): starting
07:39:26 (7595): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:46:22 (1436): wrapper (7.17.26016): starting
07:46:22 (1436): wrapper (7.17.26016): starting
07:46:22 (1436): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:43:23 (1429): wrapper (7.17.26016): starting
17:43:23 (1429): wrapper (7.17.26016): starting
17:43:23 (1429): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x56521903ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fbb7b1a4df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fbb7b208262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x56521905c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x56521907b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fbb7b1a4df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fbb7b1ff9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fbb7b1f4668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fbb7b240f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fbb7b24c393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fbb7b275373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x565219051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x56521901e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fbb7b18eca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fbb7b18ed65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x56521901aa3a]

Exiting...
19:36:55 (1333): wrapper (7.17.26016): starting
19:36:55 (1333): wrapper (7.17.26016): starting
19:36:55 (1333): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55ac6c63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f2ac6fabdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f2ac700f262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55ac6c65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55ac6c67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f2ac6fabdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f2ac70069ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f2ac6ffb668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f2ac7047f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f2ac7053393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f2ac707c373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55ac6c651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55ac6c61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f2ac6f95ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f2ac6f95d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55ac6c61aa3a]

Exiting...
21:46:33 (1350): wrapper (7.17.26016): starting
21:46:33 (1350): wrapper (7.17.26016): starting
21:46:33 (1350): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55e5ffe3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f9c8e2b4df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f9c8e318262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55e5ffe5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55e5ffe7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f9c8e2b4df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f9c8e30f9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f9c8e304668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f9c8e350f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f9c8e35c393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f9c8e385373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55e5ffe51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55e5ffe1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f9c8e29eca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f9c8e29ed65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55e5ffe1aa3a]

Exiting...
07:18:58 (1403): wrapper (7.17.26016): starting
07:18:58 (1403): wrapper (7.17.26016): starting
07:18:58 (1403): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5581ea43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fd1da9fcdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fd1daa60262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5581ea45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5581ea47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fd1da9fcdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fd1daa579ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fd1daa4c668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fd1daa98f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fd1daaa4393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fd1daacd373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5581ea451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5581ea41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fd1da9e6ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fd1da9e6d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5581ea41aa3a]

Exiting...
08:02:00 (1345): wrapper (7.17.26016): starting
08:02:00 (1345): wrapper (7.17.26016): starting
08:02:00 (1345): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55852f43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f05ef7c9df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f05ef82d262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55852f45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55852f47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f05ef7c9df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f05ef8249ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f05ef819668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f05ef865f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f05ef871393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f05ef89a373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55852f451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55852f41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f05ef7b3ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f05ef7b3d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55852f41aa3a]

Exiting...
07:05:17 (1403): wrapper (7.17.26016): starting
07:05:17 (1403): wrapper (7.17.26016): starting
07:05:17 (1403): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:12:42 (1403): cmdock exited; CPU time 7611.782609
09:12:42 (1403): called boinc_finish(0)

</stderr_txt>
]]>