Task 98788859

Name	ebola_RdRp_v1_sidock_00448507_r3_s-24.0_0
Workunit	69336043
Created	18 Jan 2026, 5:10:14 UTC
Sent	19 Jan 2026, 6:39:20 UTC
Report deadline	23 Jan 2026, 6:39:20 UTC
Received	23 Jan 2026, 8:07:31 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82763
Run time	1 days 11 hours 3 min 20 sec
CPU time	1 days 10 hours 52 min 52 sec
Validate state	Valid
Credit	278.37
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.56 MB
Peak swap size	246.50 MB
Peak disk usage	20.24 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:39:25 (7577): wrapper (7.17.26016): starting
07:39:25 (7577): wrapper (7.17.26016): starting
07:39:25 (7577): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:46:22 (1430): wrapper (7.17.26016): starting
07:46:22 (1430): wrapper (7.17.26016): starting
07:46:22 (1430): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:52:23 (1380): wrapper (7.17.26016): starting
17:52:23 (1380): wrapper (7.17.26016): starting
17:52:23 (1380): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:43:23 (1426): wrapper (7.17.26016): starting
17:43:23 (1426): wrapper (7.17.26016): starting
17:43:23 (1426): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x556777c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f8061522df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f8061586262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x556777c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x556777c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f8061522df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f806157d9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f8061572668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f80615bef7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f80615ca393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f80615f3373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x556777c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x556777c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f806150cca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f806150cd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x556777c1aa3a]

Exiting...
19:36:55 (1330): wrapper (7.17.26016): starting
19:36:55 (1330): wrapper (7.17.26016): starting
19:36:55 (1330): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55cfc943ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f5a5bc81df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f5a5bce5262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55cfc945c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55cfc947b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f5a5bc81df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f5a5bcdc9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f5a5bcd1668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f5a5bd1df7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f5a5bd29393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f5a5bd52373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55cfc9451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55cfc941e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f5a5bc6bca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f5a5bc6bd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55cfc941aa3a]

Exiting...
21:46:33 (1344): wrapper (7.17.26016): starting
21:46:33 (1344): wrapper (7.17.26016): starting
21:46:33 (1344): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55d35ee3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f2597355df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f25973b9262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55d35ee5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55d35ee7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f2597355df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f25973b09ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f25973a5668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f25973f1f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f25973fd393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f2597426373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55d35ee51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55d35ee1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f259733fca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f259733fd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55d35ee1aa3a]

Exiting...
07:18:58 (1396): wrapper (7.17.26016): starting
07:18:58 (1396): wrapper (7.17.26016): starting
07:18:58 (1396): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x560d19e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f10978a2df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f1097906262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x560d19e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x560d19e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f10978a2df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f10978fd9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f10978f2668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f109793ef7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f109794a393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f1097973373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x560d19e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x560d19e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f109788cca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f109788cd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x560d19e1aa3a]

Exiting...
08:02:00 (1342): wrapper (7.17.26016): starting
08:02:00 (1342): wrapper (7.17.26016): starting
08:02:00 (1342): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55b1d243ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f6f1a8c0df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f6f1a924262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55b1d245c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55b1d247b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f6f1a8c0df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f6f1a91b9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f6f1a910668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f6f1a95cf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f6f1a968393]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x38) [0x7f6f1a979d68]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a) [0x55b1d2451a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55b1d241e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f6f1a8aaca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f6f1a8aad65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55b1d241aa3a]

Exiting...
07:05:17 (1400): wrapper (7.17.26016): starting
07:05:17 (1400): wrapper (7.17.26016): starting
07:05:17 (1400): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:07:21 (1400): cmdock exited; CPU time 7289.337262
09:07:21 (1400): called boinc_finish(0)

</stderr_txt>
]]>