Task 98788857

Name	ebola_RdRp_v1_sidock_00448507_r1_s-24.0_0
Workunit	69336041
Created	18 Jan 2026, 5:10:14 UTC
Sent	19 Jan 2026, 6:39:20 UTC
Report deadline	23 Jan 2026, 6:39:20 UTC
Received	23 Jan 2026, 8:44:18 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82763
Run time	1 days 11 hours 37 min 49 sec
CPU time	1 days 11 hours 27 min 19 sec
Validate state	Valid
Credit	281.90
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.13 MB
Peak swap size	247.27 MB
Peak disk usage	20.22 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:39:25 (7579): wrapper (7.17.26016): starting
07:39:25 (7579): wrapper (7.17.26016): starting
07:39:25 (7579): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:46:22 (1434): wrapper (7.17.26016): starting
07:46:22 (1434): wrapper (7.17.26016): starting
07:46:22 (1434): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:52:23 (1385): wrapper (7.17.26016): starting
17:52:23 (1385): wrapper (7.17.26016): starting
17:52:23 (1385): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:43:23 (1428): wrapper (7.17.26016): starting
17:43:23 (1428): wrapper (7.17.26016): starting
17:43:23 (1428): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55e1f743ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fb869f5adf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fb869fbe262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55e1f745c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55e1f747b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fb869f5adf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fb869fb59ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fb869faa668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fb869ff6f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fb86a002393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fb86a02b373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55e1f7451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55e1f741e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fb869f44ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fb869f44d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55e1f741aa3a]

Exiting...
19:36:55 (1332): wrapper (7.17.26016): starting
19:36:55 (1332): wrapper (7.17.26016): starting
19:36:55 (1332): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x56098e63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f29f8563df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f29f85c7262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x56098e65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x56098e67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f29f8563df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f29f85be9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f29f85b3668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f29f85fff7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f29f860b393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f29f8634373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x56098e651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x56098e61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f29f854dca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f29f854dd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x56098e61aa3a]

Exiting...
21:46:33 (1349): wrapper (7.17.26016): starting
21:46:33 (1349): wrapper (7.17.26016): starting
21:46:33 (1349): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5582b3c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fe2d3a5edf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fe2d3ac2262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5582b3c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5582b3c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fe2d3a5edf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fe2d3ab99ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fe2d3aae668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fe2d3afaf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fe2d3b06393]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x38) [0x7fe2d3b17d68]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a) [0x5582b3c51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5582b3c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fe2d3a48ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fe2d3a48d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5582b3c1aa3a]

Exiting...
07:18:58 (1401): wrapper (7.17.26016): starting
07:18:58 (1401): wrapper (7.17.26016): starting
07:18:58 (1401): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55f8e0e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f60b803ddf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f60b80a1262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55f8e0e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55f8e0e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f60b803ddf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f60b80989ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f60b808d668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f60b80d9f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f60b80e5393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f60b810e373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55f8e0e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55f8e0e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f60b8027ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f60b8027d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55f8e0e1aa3a]

Exiting...
08:02:00 (1344): wrapper (7.17.26016): starting
08:02:00 (1344): wrapper (7.17.26016): starting
08:02:00 (1344): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5572dec3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f0da67d9df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f0da683d262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5572dec5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5572dec7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f0da67d9df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f0da68349ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f0da6829668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f0da6875f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f0da6881393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f0da68aa373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5572dec51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5572dec1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f0da67c3ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f0da67c3d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5572dec1aa3a]

Exiting...
07:05:17 (1402): wrapper (7.17.26016): starting
07:05:17 (1402): wrapper (7.17.26016): starting
07:05:17 (1402): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/9/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:44:07 (1402): cmdock exited; CPU time 9494.474995
09:44:07 (1402): called boinc_finish(0)

</stderr_txt>
]]>