Task 98788827

Name	ebola_RdRp_v1_sidock_00448482_r2_s-24.0_0
Workunit	69335942
Created	18 Jan 2026, 5:10:12 UTC
Sent	19 Jan 2026, 6:39:20 UTC
Report deadline	23 Jan 2026, 6:39:20 UTC
Received	23 Jan 2026, 9:25:19 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82763
Run time	1 days 12 hours 19 min 25 sec
CPU time	1 days 12 hours 9 min 2 sec
Validate state	Valid
Credit	287.39
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	238.77 MB
Peak swap size	245.64 MB
Peak disk usage	20.20 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:39:25 (7578): wrapper (7.17.26016): starting
07:39:25 (7578): wrapper (7.17.26016): starting
07:39:25 (7578): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:46:22 (1433): wrapper (7.17.26016): starting
07:46:22 (1433): wrapper (7.17.26016): starting
07:46:22 (1433): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:52:23 (1384): wrapper (7.17.26016): starting
17:52:23 (1384): wrapper (7.17.26016): starting
17:52:23 (1384): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:43:23 (1427): wrapper (7.17.26016): starting
17:43:23 (1427): wrapper (7.17.26016): starting
17:43:23 (1427): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55eb41a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f2baea4cdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f2baeab0262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55eb41a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55eb41a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f2baea4cdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f2baeaa79ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f2baea9c668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f2baeae8f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f2baeaf4393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f2baeb1d373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55eb41a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55eb41a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f2baea36ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f2baea36d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55eb41a1aa3a]

Exiting...
19:36:55 (1331): wrapper (7.17.26016): starting
19:36:55 (1331): wrapper (7.17.26016): starting
19:36:55 (1331): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55c64123ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f67933dfdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f6793443262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55c64125c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55c64127b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f67933dfdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f679343a9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f679342f668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f679347bf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f6793487393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f67934b0373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55c641251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55c64121e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f67933c9ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f67933c9d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55c64121aa3a]

Exiting...
21:46:33 (1348): wrapper (7.17.26016): starting
21:46:33 (1348): wrapper (7.17.26016): starting
21:46:33 (1348): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x562cbfe3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f959a28fdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f959a2f3262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x562cbfe5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x562cbfe7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f959a28fdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f959a2ea9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f959a2df668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f959a32bf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f959a337393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f959a360373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x562cbfe51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x562cbfe1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f959a279ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f959a279d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x562cbfe1aa3a]

Exiting...
07:18:58 (1400): wrapper (7.17.26016): starting
07:18:58 (1400): wrapper (7.17.26016): starting
07:18:58 (1400): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x556b9fc3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f49f0b8cdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f49f0bf0262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x556b9fc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x556b9fc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f49f0b8cdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f49f0be79ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f49f0bdc668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f49f0c28f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f49f0c34393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f49f0c5d373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x556b9fc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x556b9fc1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f49f0b76ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f49f0b76d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x556b9fc1aa3a]

Exiting...
08:02:00 (1343): wrapper (7.17.26016): starting
08:02:00 (1343): wrapper (7.17.26016): starting
08:02:00 (1343): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5643a7c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7faf3f697df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7faf3f6fb262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5643a7c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5643a7c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7faf3f697df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7faf3f6f29ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7faf3f6e7668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7faf3f733f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7faf3f73f393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7faf3f768373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5643a7c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5643a7c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7faf3f681ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7faf3f681d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5643a7c1aa3a]

Exiting...
07:05:17 (1401): wrapper (7.17.26016): starting
07:05:17 (1401): wrapper (7.17.26016): starting
07:05:17 (1401): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:25:08 (1401): cmdock exited; CPU time 11957.657082
10:25:08 (1401): called boinc_finish(0)

</stderr_txt>
]]>