Task 98788826

Name	ebola_RdRp_v1_sidock_00448500_r1_s-24.0_0
Workunit	69336013
Created	18 Jan 2026, 5:10:12 UTC
Sent	19 Jan 2026, 6:39:20 UTC
Report deadline	23 Jan 2026, 6:39:20 UTC
Received	23 Jan 2026, 7:57:45 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82763
Run time	1 days 10 hours 44 min 28 sec
CPU time	1 days 10 hours 34 min 11 sec
Validate state	Valid
Credit	277.23
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	238.52 MB
Peak swap size	245.50 MB
Peak disk usage	20.16 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:39:26 (7596): wrapper (7.17.26016): starting
07:39:26 (7596): wrapper (7.17.26016): starting
07:39:26 (7596): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:46:22 (1437): wrapper (7.17.26016): starting
07:46:22 (1437): wrapper (7.17.26016): starting
07:46:22 (1437): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:43:23 (1430): wrapper (7.17.26016): starting
17:43:23 (1430): wrapper (7.17.26016): starting
17:43:23 (1430): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x564bd663ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fa966891df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fa9668f5262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x564bd665c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x564bd667b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fa966891df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fa9668ec9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fa9668e1668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fa96692df7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fa966939393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fa966962373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x564bd6651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x564bd661e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fa96687bca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fa96687bd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x564bd661aa3a]

Exiting...
19:36:55 (1334): wrapper (7.17.26016): starting
19:36:55 (1334): wrapper (7.17.26016): starting
19:36:55 (1334): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5577e723ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f936c63edf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f936c6a2262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5577e725c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5577e727b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f936c63edf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f936c6999ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f936c68e668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f936c6daf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f936c6e6393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f936c70f373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5577e7251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5577e721e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f936c628ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f936c628d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5577e721aa3a]

Exiting...
21:46:33 (1352): wrapper (7.17.26016): starting
21:46:33 (1352): wrapper (7.17.26016): starting
21:46:33 (1352): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55d368a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f4cdb5e9df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f4cdb64d262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55d368a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55d368a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f4cdb5e9df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f4cdb6449ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f4cdb639668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f4cdb685f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f4cdb691393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f4cdb6ba373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55d368a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55d368a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f4cdb5d3ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f4cdb5d3d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55d368a1aa3a]

Exiting...
07:18:58 (1404): wrapper (7.17.26016): starting
07:18:58 (1404): wrapper (7.17.26016): starting
07:18:58 (1404): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x557fc9e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f168e028df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f168e08c262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x557fc9e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x557fc9e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f168e028df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f168e0839ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f168e078668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f168e0c4f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f168e0d0393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f168e0f9373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x557fc9e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x557fc9e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f168e012ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f168e012d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x557fc9e1aa3a]

Exiting...
08:02:00 (1346): wrapper (7.17.26016): starting
08:02:00 (1346): wrapper (7.17.26016): starting
08:02:00 (1346): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x559e0fe3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f3a08920df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f3a08984262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x559e0fe5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x559e0fe7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f3a08920df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f3a0897b9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f3a08970668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f3a089bcf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f3a089c8393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f3a089f1373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x559e0fe51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x559e0fe1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f3a0890aca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f3a0890ad65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x559e0fe1aa3a]

Exiting...
07:05:17 (1404): wrapper (7.17.26016): starting
07:05:17 (1404): wrapper (7.17.26016): starting
07:05:17 (1404): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:57:35 (1404): cmdock exited; CPU time 6703.512709
08:57:35 (1404): called boinc_finish(0)

</stderr_txt>
]]>