Task 98788823

Name	ebola_RdRp_v1_sidock_00448481_r2_s-24.0_0
Workunit	69335938
Created	18 Jan 2026, 5:10:12 UTC
Sent	19 Jan 2026, 6:39:20 UTC
Report deadline	23 Jan 2026, 6:39:20 UTC
Received	23 Jan 2026, 8:47:07 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82763
Run time	1 days 11 hours 41 min 18 sec
CPU time	1 days 11 hours 30 min 48 sec
Validate state	Valid
Credit	282.36
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.58 MB
Peak swap size	247.54 MB
Peak disk usage	20.14 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:39:27 (7617): wrapper (7.17.26016): starting
07:39:28 (7617): wrapper (7.17.26016): starting
07:39:28 (7617): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:46:22 (1439): wrapper (7.17.26016): starting
07:46:22 (1439): wrapper (7.17.26016): starting
07:46:22 (1439): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:43:23 (1432): wrapper (7.17.26016): starting
17:43:23 (1432): wrapper (7.17.26016): starting
17:43:23 (1432): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55ea78e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fbe30121df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fbe30185262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55ea78e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55ea78e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fbe30121df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fbe3017c9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fbe30171668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fbe301bdf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fbe301c9393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fbe301f2373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55ea78e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55ea78e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fbe3010bca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fbe3010bd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55ea78e1aa3a]

Exiting...
19:36:55 (1336): wrapper (7.17.26016): starting
19:36:55 (1336): wrapper (7.17.26016): starting
19:36:55 (1336): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55d09783ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fdc5140fdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fdc51473262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55d09785c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55d09787b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fdc5140fdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fdc5146a9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fdc5145f668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fdc514abf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fdc514b7393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fdc514e0373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55d097851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55d09781e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fdc513f9ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fdc513f9d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55d09781aa3a]

Exiting...
21:46:33 (1354): wrapper (7.17.26016): starting
21:46:33 (1354): wrapper (7.17.26016): starting
21:46:33 (1354): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x562c2803ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7ffacfb55df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7ffacfbb9262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x562c2805c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x562c2807b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7ffacfb55df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7ffacfbb09ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7ffacfba5668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7ffacfbf1f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7ffacfbfd393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7ffacfc26373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x562c28051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x562c2801e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7ffacfb3fca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7ffacfb3fd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x562c2801aa3a]

Exiting...
07:18:58 (1406): wrapper (7.17.26016): starting
07:18:58 (1406): wrapper (7.17.26016): starting
07:18:58 (1406): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55b651e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fb368ba3df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fb368c07262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55b651e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55b651e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fb368ba3df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fb368bfe9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fb368bf3668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fb368c3ff7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fb368c4b393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fb368c74373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55b651e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55b651e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fb368b8dca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fb368b8dd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55b651e1aa3a]

Exiting...
08:02:00 (1349): wrapper (7.17.26016): starting
08:02:00 (1349): wrapper (7.17.26016): starting
08:02:00 (1349): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55eccf43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f4e70ed9df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f4e70f3d262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55eccf45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55eccf47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f4e70ed9df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f4e70f349ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f4e70f29668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f4e70f75f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f4e70f81393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f4e70faa373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55eccf451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55eccf41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f4e70ec3ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f4e70ec3d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55eccf41aa3a]

Exiting...
07:05:17 (1407): wrapper (7.17.26016): starting
07:05:17 (1407): wrapper (7.17.26016): starting
07:05:17 (1407): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:46:55 (1407): cmdock exited; CPU time 9660.995065
09:46:55 (1407): called boinc_finish(0)

</stderr_txt>
]]>