Task 98788773

Name	ebola_RdRp_v1_sidock_00448486_r1_s-24.0_0
Workunit	69335957
Created	18 Jan 2026, 5:10:10 UTC
Sent	19 Jan 2026, 6:36:21 UTC
Report deadline	23 Jan 2026, 6:36:21 UTC
Received	23 Jan 2026, 8:30:20 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82763
Run time	1 days 11 hours 27 min 34 sec
CPU time	1 days 11 hours 17 min 30 sec
Validate state	Valid
Credit	280.53
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.78 MB
Peak swap size	246.64 MB
Peak disk usage	20.22 MB
Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:38:50 (7308): wrapper (7.17.26016): starting
07:38:50 (7308): wrapper (7.17.26016): starting
07:38:50 (7308): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:46:22 (1420): wrapper (7.17.26016): starting
07:46:22 (1420): wrapper (7.17.26016): starting
07:46:22 (1420): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:52:23 (1371): wrapper (7.17.26016): starting
17:52:23 (1371): wrapper (7.17.26016): starting
17:52:23 (1371): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:43:23 (1425): wrapper (7.17.26016): starting
17:43:23 (1425): wrapper (7.17.26016): starting
17:43:23 (1425): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5597d283ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f811746fdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f81174d3262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5597d285c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5597d287b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f811746fdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f81174ca9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f81174bf668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f811750bf7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f8117517393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f8117540373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5597d2851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5597d281e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f8117459ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f8117459d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5597d281aa3a]

Exiting...
19:36:55 (1329): wrapper (7.17.26016): starting
19:36:55 (1329): wrapper (7.17.26016): starting
19:36:55 (1329): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5647ebc3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f42342c7df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f423432b262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5647ebc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5647ebc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f42342c7df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f42343229ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f4234317668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f4234363f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f423436f393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f4234398373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5647ebc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5647ebc1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f42342b1ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f42342b1d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5647ebc1aa3a]

Exiting...
21:46:33 (1335): wrapper (7.17.26016): starting
21:46:33 (1335): wrapper (7.17.26016): starting
21:46:33 (1335): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55b20723ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fa3be209df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fa3be26d262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55b20725c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55b20727b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fa3be209df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fa3be2649ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fa3be259668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fa3be2a5f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fa3be2b1393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fa3be2da373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55b207251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55b20721e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fa3be1f3ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fa3be1f3d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55b20721aa3a]

Exiting...
07:18:58 (1387): wrapper (7.17.26016): starting
07:18:58 (1387): wrapper (7.17.26016): starting
07:18:58 (1387): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55c5a143ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f6b062c9df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f6b0632d262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55c5a145c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55c5a147b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f6b062c9df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f6b063249ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f6b06319668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f6b06365f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f6b06371393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f6b0639a373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55c5a1451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55c5a141e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f6b062b3ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f6b062b3d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55c5a141aa3a]

Exiting...
08:02:00 (1341): wrapper (7.17.26016): starting
08:02:00 (1341): wrapper (7.17.26016): starting
08:02:00 (1341): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55fdbf63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fbd793a7df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fbd7940b262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55fdbf65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55fdbf67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fbd793a7df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fbd794029ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fbd793f7668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fbd79443f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fbd7944f393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fbd79478373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55fdbf651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55fdbf61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fbd79391ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fbd79391d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55fdbf61aa3a]

Exiting...
07:05:17 (1399): wrapper (7.17.26016): starting
07:05:17 (1399): wrapper (7.17.26016): starting
07:05:17 (1399): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:30:09 (1399): cmdock exited; CPU time 8662.749250
09:30:09 (1399): called boinc_finish(0)

</stderr_txt>
]]>