Task 98742862

Name ebola_RdRp_v1_sidock_00438620_r3_s-24.0_0
Workunit 69296495
Created 15 Jan 2026, 5:57:55 UTC
Sent 17 Jan 2026, 20:42:54 UTC
Report deadline 21 Jan 2026, 20:42:54 UTC
Received 19 Jan 2026, 14:35:56 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 41371
Run time 1 days 13 hours 15 min 56 sec
CPU time 1 days 10 hours 39 min 9 sec
Validate state Valid
Credit 789.95
Device peak FLOPS 4.62 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.77 MB
Peak swap size 247.16 MB
Peak disk usage 20.28 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:44:46 (769879): wrapper (7.17.26016): starting
00:44:46 (769879): wrapper (7.17.26016): starting
00:44:46 (769879): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (18 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x6196e983ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x78dafae45f60]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x17) [0x78dafaeb5ca7]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x6196e985c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x6196e987b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x78dafae45f60]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0) [0x6196e983aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x78dafae45f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x78dafaeac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x78dafaea00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x78dafaef62f2]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x78dafaf03fd7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x78dafaf36f2a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x6196e9851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x6196e981e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x78dafae2a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x78dafae2a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x6196e981aa3a]

Exiting...
18:32:14 (2672): wrapper (7.17.26016): starting
18:32:14 (2672): wrapper (7.17.26016): starting
18:32:14 (2672): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:16:56 (23788): wrapper (7.17.26016): starting
06:16:56 (23788): wrapper (7.17.26016): starting
06:16:56 (23788): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:35:42 (23788): cmdock exited; CPU time 31897.519385
15:35:42 (23788): called boinc_finish(0)

</stderr_txt>
]]>


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