Task 98741372

Name ebola_RdRp_v1_sidock_00438244_r4_s-24.0_0
Workunit 69294992
Created 15 Jan 2026, 5:56:35 UTC
Sent 17 Jan 2026, 19:25:25 UTC
Report deadline 21 Jan 2026, 19:25:25 UTC
Received 19 Jan 2026, 13:09:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 41371
Run time 1 days 13 hours 40 min 29 sec
CPU time 1 days 10 hours 42 min 29 sec
Validate state Valid
Credit 801.61
Device peak FLOPS 4.62 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.55 MB
Peak swap size 248.17 MB
Peak disk usage 20.16 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
22:51:32 (764848): wrapper (7.17.26016): starting
22:51:32 (764848): wrapper (7.17.26016): starting
22:51:32 (764848): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5de563e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7f8c23045f60]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x17) [0x7f8c230b5ca7]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5de563e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5de563e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7f8c23045f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x7f8c230ac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x7f8c230a00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x7f8c230f62f2]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x7f8c23103fd7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x7f8c23136f2a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5de563e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5de563e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x7f8c2302a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x7f8c2302a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5de563e1aa3a]

Exiting...
18:32:14 (2662): wrapper (7.17.26016): starting
18:32:14 (2662): wrapper (7.17.26016): starting
18:32:14 (2662): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:16:56 (23777): wrapper (7.17.26016): starting
06:16:56 (23777): wrapper (7.17.26016): starting
06:16:56 (23777): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:08:54 (23777): cmdock exited; CPU time 26955.801081
14:08:54 (23777): called boinc_finish(0)

</stderr_txt>
]]>


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