Task 98741338

Name ebola_RdRp_v1_sidock_00438251_r3_s-24.0_0
Workunit 69295019
Created 15 Jan 2026, 5:56:34 UTC
Sent 17 Jan 2026, 19:25:25 UTC
Report deadline 21 Jan 2026, 19:25:25 UTC
Received 19 Jan 2026, 13:40:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 41371
Run time 1 days 14 hours 8 min 46 sec
CPU time 1 days 11 hours 20 min 21 sec
Validate state Valid
Credit 803.98
Device peak FLOPS 4.62 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.07 MB
Peak swap size 247.62 MB
Peak disk usage 20.17 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
22:57:46 (765126): wrapper (7.17.26016): starting
22:57:46 (765126): wrapper (7.17.26016): starting
22:57:46 (765126): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (23 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x629e8603ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7c6610245f60]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11d) [0x7c66102a5fed]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e) [0x7c6610245e2e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x27) [0x7c6610228888]
/lib/x86_64-linux-gnu/libc.so.6(+0x29915) [0x7c6610229915]
/lib/x86_64-linux-gnu/libc.so.6(+0xb08a5) [0x7c66102b08a5]
/lib/x86_64-linux-gnu/libc.so.6(+0xb08c4) [0x7c66102b08c4]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x629e8605c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x629e8607b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7c6610245f60]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0) [0x629e8603aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7c6610245f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x7c66102ac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x7c66102a00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x7c66102f62f2]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x7c6610303fd7]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e) [0x7c661031ad8e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a) [0x629e86051a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x629e8601e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x7c661022a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x7c661022a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x629e8601aa3a]

Exiting...
18:32:14 (2667): wrapper (7.17.26016): starting
18:32:14 (2667): wrapper (7.17.26016): starting
18:32:14 (2667): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:16:56 (23782): wrapper (7.17.26016): starting
06:16:56 (23782): wrapper (7.17.26016): starting
06:16:56 (23782): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:40:40 (23782): cmdock exited; CPU time 28794.342845
14:40:40 (23782): called boinc_finish(0)

</stderr_txt>
]]>


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