Task 98738696

Name ebola_RdRp_v1_sidock_00437589_r2_s-24.0_0
Workunit 69292370
Created 15 Jan 2026, 5:54:11 UTC
Sent 17 Jan 2026, 16:57:21 UTC
Report deadline 21 Jan 2026, 16:57:21 UTC
Received 19 Jan 2026, 11:54:26 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 41371
Run time 1 days 13 hours 3 min
CPU time 1 days 10 hours 9 min 42 sec
Validate state Valid
Credit 815.78
Device peak FLOPS 4.62 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.48 MB
Peak swap size 247.84 MB
Peak disk usage 20.12 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
22:18:08 (763369): wrapper (7.17.26016): starting
22:18:08 (763369): wrapper (7.17.26016): starting
22:18:08 (763369): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5a9d66e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x74f3fa445f60]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11d) [0x74f3fa4a5fed]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e) [0x74f3fa445e2e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x27) [0x74f3fa428888]
/lib/x86_64-linux-gnu/libc.so.6(+0x29915) [0x74f3fa429915]
/lib/x86_64-linux-gnu/libc.so.6(+0xb08a5) [0x74f3fa4b08a5]
/lib/x86_64-linux-gnu/libc.so.6(+0xb08c4) [0x74f3fa4b08c4]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5a9d66e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5a9d66e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x74f3fa445f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x74f3fa4ac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x74f3fa4a00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x74f3fa4f62f2]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x74f3fa503fd7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x74f3fa536f2a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5a9d66e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd) [0x5a9d66e3cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0xa3d64) [0x74f3fa4a3d64]
/lib/x86_64-linux-gnu/libc.so.6(+0x1373bc) [0x74f3fa5373bc]

Exiting...
18:32:14 (2658): wrapper (7.17.26016): starting
18:32:14 (2658): wrapper (7.17.26016): starting
18:32:14 (2658): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:16:56 (23771): wrapper (7.17.26016): starting
06:16:56 (23771): wrapper (7.17.26016): starting
06:16:56 (23771): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:54:12 (23771): cmdock exited; CPU time 22636.636849
12:54:12 (23771): called boinc_finish(0)

</stderr_txt>
]]>


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