Task 98738687

Name ebola_RdRp_v1_sidock_00437575_r1_s-24.0_0
Workunit 69292313
Created 15 Jan 2026, 5:54:10 UTC
Sent 17 Jan 2026, 16:57:21 UTC
Report deadline 21 Jan 2026, 16:57:21 UTC
Received 19 Jan 2026, 13:09:34 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 41371
Run time 1 days 14 hours 37 min 53 sec
CPU time 1 days 11 hours 29 min 46 sec
Validate state Valid
Credit 816.19
Device peak FLOPS 4.62 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.56 MB
Peak swap size 247.89 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
21:48:16 (762035): wrapper (7.17.26016): starting
21:48:16 (762035): wrapper (7.17.26016): starting
21:48:16 (762035): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (15 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5b03ad23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x72502fa45f60]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x17) [0x72502fab5ca7]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5b03ad25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5b03ad27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x72502fa45f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x72502faac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x72502faa00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x72502faf62f2]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x72502fb03fd7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x72502fb36f2a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5b03ad251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3cdcd) [0x5b03ad23cdcd]
/lib/x86_64-linux-gnu/libc.so.6(+0xa3d64) [0x72502faa3d64]
/lib/x86_64-linux-gnu/libc.so.6(+0x1373bc) [0x72502fb373bc]

Exiting...
18:32:14 (2656): wrapper (7.17.26016): starting
18:32:14 (2656): wrapper (7.17.26016): starting
18:32:14 (2656): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:16:56 (23769): wrapper (7.17.26016): starting
06:16:56 (23769): wrapper (7.17.26016): starting
06:16:56 (23769): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:09:13 (23769): cmdock exited; CPU time 26979.151007
14:09:13 (23769): called boinc_finish(0)

</stderr_txt>
]]>


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