Task 98729435

Name	ebola_RdRp_v1_sidock_00435270_r4_s-24.0_0
Workunit	69283096
Created	15 Jan 2026, 5:45:53 UTC
Sent	17 Jan 2026, 9:58:39 UTC
Report deadline	21 Jan 2026, 9:58:39 UTC
Received	24 Jan 2026, 13:54:14 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	82637
Run time	16 hours 48 min 51 sec
CPU time	16 hours 47 min 34 sec
Validate state	Valid
Credit	138.61
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.03 MB
Peak swap size	247.40 MB
Peak disk usage	20.31 MB
Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:58:44 (13331): wrapper (7.17.26016): starting
10:58:44 (13331): wrapper (7.17.26016): starting
10:58:44 (13331): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:08:03 (3310): wrapper (7.17.26016): starting
14:08:03 (3310): wrapper (7.17.26016): starting
14:08:03 (3310): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:58:48 (4227): wrapper (7.17.26016): starting
10:58:48 (4227): wrapper (7.17.26016): starting
10:58:48 (4227): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x653429e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7593f1645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7593f16add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x653429e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x653429e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7593f1645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7593f16ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7593f16f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7593f172975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x653429e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x653429e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7593f162a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7593f162a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x653429e1aa3a]

Exiting...
20:04:04 (3933): wrapper (7.17.26016): starting
20:04:04 (3933): wrapper (7.17.26016): starting
20:04:04 (3933): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x627a24e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72100f645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x72100f6add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x627a24e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x627a24e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72100f645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72100f6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72100f6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72100f72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x627a24e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x627a24e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72100f62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72100f62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x627a24e1aa3a]

Exiting...
17:04:53 (3611): wrapper (7.17.26016): starting
17:04:53 (3611): wrapper (7.17.26016): starting
17:04:53 (3611): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5898b7a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7ad1d6445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7ad1d64add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5898b7a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5898b7a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7ad1d6445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7ad1d64ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7ad1d64f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7ad1d652975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5898b7a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5898b7a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7ad1d642a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7ad1d642a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5898b7a1aa3a]

Exiting...
21:19:37 (3430): wrapper (7.17.26016): starting
21:19:37 (3430): wrapper (7.17.26016): starting
21:19:37 (3430): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x61fa9143ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x757b07445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x757b074add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x61fa9145c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x61fa9147b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x757b07445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x757b074ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x757b074f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x757b0752975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x61fa91451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x61fa9141e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x757b0742a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x757b0742a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x61fa9141aa3a]

Exiting...
18:46:31 (3568): wrapper (7.17.26016): starting
18:46:31 (3568): wrapper (7.17.26016): starting
18:46:31 (3568): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5864ddc3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x714cb0645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x714cb06add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5864ddc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5864ddc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x714cb0645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x714cb06ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x714cb06f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x714cb072975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5864ddc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5864ddc1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x714cb062a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x714cb062a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5864ddc1aa3a]

Exiting...
11:05:11 (3531): wrapper (7.17.26016): starting
11:05:11 (3531): wrapper (7.17.26016): starting
11:05:11 (3531): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57757fa3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71a6e7245330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x71a6e72add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57757fa5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57757fa7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71a6e7245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x71a6e72ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x71a6e72f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71a6e732975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57757fa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57757fa1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71a6e722a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71a6e722a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57757fa1aa3a]

Exiting...
14:34:34 (3732): wrapper (7.17.26016): starting
14:34:35 (3732): wrapper (7.17.26016): starting
14:34:35 (3732): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:54:01 (3732): cmdock exited; CPU time 1148.309576
14:54:01 (3732): called boinc_finish(0)

</stderr_txt>
]]>