Task 98703649

Name ebola_RdRp_v1_sidock_00428832_r3_s-24.0_0
Workunit 69257343
Created 15 Jan 2026, 5:22:15 UTC
Sent 16 Jan 2026, 11:30:58 UTC
Report deadline 20 Jan 2026, 11:30:58 UTC
Received 17 Jan 2026, 13:14:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 67591
Run time 10 hours 38 min 55 sec
CPU time 10 hours 38 min 55 sec
Validate state Valid
Credit 498.28
Device peak FLOPS 6.94 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 236.20 MB
Peak swap size 247.34 MB
Peak disk usage 20.17 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:45:07 (2343864): wrapper (7.17.26016): starting
19:45:07 (2343864): wrapper (7.17.26016): starting
19:45:07 (2343864): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c826423ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f9034c45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7f9034cadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c826425c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c826427b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f9034c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7f9034cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f9034cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7f9034d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c8264251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c826421e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f9034c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f9034c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c826421aa3a]

Exiting...
20:33:52 (4344): wrapper (7.17.26016): starting
20:33:52 (4344): wrapper (7.17.26016): starting
20:33:52 (4344): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:14:12 (4344): cmdock exited; CPU time 38333.662057
14:14:12 (4344): called boinc_finish(0)

</stderr_txt>
]]>


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