Task 98686340

Name ebola_RdRp_v1_sidock_00424493_r4_s-24.0_0
Workunit 69239988
Created 15 Jan 2026, 5:06:43 UTC
Sent 15 Jan 2026, 20:51:30 UTC
Report deadline 19 Jan 2026, 20:51:30 UTC
Received 19 Jan 2026, 8:17:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 56894
Run time 9 hours 29 min 21 sec
CPU time 9 hours 28 min 53 sec
Validate state Valid
Credit 475.06
Device peak FLOPS 6.06 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.30 MB
Peak swap size 247.35 MB
Peak disk usage 20.24 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:20:12 (47443): wrapper (7.17.26016): starting
11:20:12 (47443): wrapper (7.17.26016): starting
11:20:12 (47443): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55ac20a3ff8c]
/usr/lib/libc.so.6(+0x3e4d0) [0x7f6494c3e4d0]
/usr/lib/libc.so.6(__libc_free+0x17) [0x7f6494ca7f07]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55ac20a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55ac20a7b8e4]
/usr/lib/libc.so.6(+0x3e4d0) [0x7f6494c3e4d0]
/usr/lib/libc.so.6(+0x9f002) [0x7f6494c9f002]
/usr/lib/libc.so.6(+0x9316c) [0x7f6494c9316c]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x7f6494ce3bd2]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7f6494cefc57]
/usr/lib/libc.so.6(usleep+0x4a) [0x7f6494d1a53a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55ac20a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55ac20a1e784]
/usr/lib/libc.so.6(+0x27635) [0x7f6494c27635]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x7f6494c276e9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55ac20a1aa3a]

Exiting...
15:27:29 (12725): wrapper (7.17.26016): starting
15:27:29 (12725): wrapper (7.17.26016): starting
15:27:29 (12725): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:25:23 (13657): wrapper (7.17.26016): starting
10:25:23 (13657): wrapper (7.17.26016): starting
10:25:23 (13657): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:35:07 (12699): wrapper (7.17.26016): starting
15:35:07 (12699): wrapper (7.17.26016): starting
15:35:07 (12699): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:36:41 (12704): wrapper (7.17.26016): starting
10:36:41 (12704): wrapper (7.17.26016): starting
10:36:41 (12704): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:20:07 (12695): wrapper (7.17.26016): starting
07:20:07 (12695): wrapper (7.17.26016): starting
07:20:07 (12695): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:17:27 (12695): cmdock exited; CPU time 4188.874518
09:17:27 (12695): called boinc_finish(0)

</stderr_txt>
]]>


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