Task 98632124

Name ebola_RdRp_v1_sidock_00413477_r1_s-24.0_0
Workunit 69195921
Created 11 Jan 2026, 17:57:41 UTC
Sent 13 Jan 2026, 18:46:26 UTC
Report deadline 17 Jan 2026, 18:46:26 UTC
Received 15 Jan 2026, 6:07:25 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 80338
Run time 11 hours 56 min 18 sec
CPU time 11 hours 56 min 10 sec
Validate state Valid
Credit 508.69
Device peak FLOPS 6.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.58 MB
Peak swap size 247.79 MB
Peak disk usage 20.17 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:17:28 (10149): wrapper (7.17.26016): starting
10:17:28 (10149): wrapper (7.17.26016): starting
10:17:28 (10149): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5637c143ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7463d4e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7463d4e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7463d4e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7463d4e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7463d4e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7463d4ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7463d4eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7463d4eaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5637c145c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5637c147b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7463d4e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7463d4eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7463d4ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7463d4f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5637c1451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5637c141e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7463d4e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7463d4e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5637c141aa3a]

Exiting...
07:21:09 (2993): wrapper (7.17.26016): starting
07:21:10 (2993): wrapper (7.17.26016): starting
07:21:10 (2993): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:07:16 (2993): cmdock exited; CPU time 42361.389953
19:07:16 (2993): called boinc_finish(0)

</stderr_txt>
]]>


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