Task 98632070

Name	ebola_RdRp_v1_sidock_00413467_r4_s-24.0_0
Workunit	69195884
Created	11 Jan 2026, 17:57:38 UTC
Sent	13 Jan 2026, 18:46:27 UTC
Report deadline	17 Jan 2026, 18:46:27 UTC
Received	15 Jan 2026, 18:54:51 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	80338
Run time	13 hours 3 min 52 sec
CPU time	13 hours 3 min 52 sec
Validate state	Valid
Credit	550.15
Device peak FLOPS	6.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.41 MB
Peak swap size	247.77 MB
Peak disk usage	20.20 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:50:25 (7788): wrapper (7.17.26016): starting
08:50:25 (7788): wrapper (7.17.26016): starting
08:50:25 (7788): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62645d03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75963ee45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75963ee9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75963ee4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x75963ee288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x75963ee297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x75963eea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x75963eeab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x75963eeaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62645d05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62645d07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75963ee45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75963eeecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75963eef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75963ef2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62645d051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62645d01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75963ee2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75963ee2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62645d01aa3a]

Exiting...
07:20:08 (2519): wrapper (7.17.26016): starting
07:20:09 (2519): wrapper (7.17.26016): starting
07:20:09 (2519): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:59:58 (2969): wrapper (7.17.26016): starting
23:59:59 (2969): wrapper (7.17.26016): starting
23:59:59 (2969): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x636488a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79f12fa45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x79f12fa9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x79f12fa4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x79f12fa288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x79f12fa297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x79f12faa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x79f12faab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x79f12faaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x636488a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x636488a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79f12fa45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x79f12faecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x79f12faf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x79f12fb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x636488a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x636488a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79f12fa2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79f12fa2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x636488a1aa3a]

Exiting...
07:20:05 (2489): wrapper (7.17.26016): starting
07:20:06 (2489): wrapper (7.17.26016): starting
07:20:06 (2489): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:54:37 (2489): cmdock exited; CPU time 2080.371650
07:54:37 (2489): called boinc_finish(0)

</stderr_txt>
]]>