Task 98630223

Name ebola_RdRp_v1_sidock_00413002_r1_s-24.0_0
Workunit 69194021
Created 11 Jan 2026, 17:56:03 UTC
Sent 13 Jan 2026, 16:56:48 UTC
Report deadline 17 Jan 2026, 16:56:48 UTC
Received 15 Jan 2026, 8:40:43 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 81579
Run time 19 hours 4 min 13 sec
CPU time 19 hours 3 min 18 sec
Validate state Valid
Credit 4,459.97
Device peak FLOPS 5.98 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.83 MB
Peak swap size 247.48 MB
Peak disk usage 20.33 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:19:13 (146694): wrapper (7.17.26016): starting
02:19:13 (146694): wrapper (7.17.26016): starting
02:19:13 (146694): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:21:27 (154136): wrapper (7.17.26016): starting
09:21:27 (154136): wrapper (7.17.26016): starting
09:21:27 (154136): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:27:04 (162751): wrapper (7.17.26016): starting
09:27:04 (162751): wrapper (7.17.26016): starting
09:27:04 (162751): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:13:29 (173805): wrapper (7.17.26016): starting
14:13:30 (173805): wrapper (7.17.26016): starting
14:13:30 (173805): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5e9c49e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77f033445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x77f0334add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5e9c49e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5e9c49e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77f033445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77f0334ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77f0334f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77f03352975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5e9c49e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5e9c49e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77f03342a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77f03342a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5e9c49e1aa3a]

Exiting...
14:18:15 (5170): wrapper (7.17.26016): starting
14:18:15 (5170): wrapper (7.17.26016): starting
14:18:15 (5170): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:29:33 (7736): wrapper (7.17.26016): starting
14:29:33 (7736): wrapper (7.17.26016): starting
14:29:33 (7736): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:40:28 (7736): cmdock exited; CPU time 34976.556880
02:40:28 (7736): called boinc_finish(0)

</stderr_txt>
]]>


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