Task 98623635

Name ebola_RdRp_v1_sidock_00411357_r2_s-24.0_0
Workunit 69187442
Created 11 Jan 2026, 17:50:15 UTC
Sent 13 Jan 2026, 10:25:20 UTC
Report deadline 17 Jan 2026, 10:25:20 UTC
Received 15 Jan 2026, 17:50:46 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 70402
Run time 10 hours 57 min 56 sec
CPU time 10 hours 55 min 59 sec
Validate state Valid
Credit 484.42
Device peak FLOPS 5.98 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.92 MB
Peak swap size 248.32 MB
Peak disk usage 20.18 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:33:38 (245524): wrapper (7.17.26016): starting
11:33:38 (245524): wrapper (7.17.26016): starting
11:33:38 (245524): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x56330ee3ff8c]
/usr/lib/libc.so.6(+0x3e4d0) [0x7fbc4fc3e4d0]
/usr/lib/libc.so.6(+0x9890c) [0x7fbc4fc9890c]
/usr/lib/libc.so.6(gsignal+0x20) [0x7fbc4fc3e3a0]
/usr/lib/libc.so.6(abort+0x26) [0x7fbc4fc2557a]
/usr/lib/libc.so.6(+0x26613) [0x7fbc4fc26613]
/usr/lib/libc.so.6(+0xa2d25) [0x7fbc4fca2d25]
/usr/lib/libc.so.6(+0xa2d44) [0x7fbc4fca2d44]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x56330ee5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x56330ee7b8e4]
/usr/lib/libc.so.6(+0x3e4d0) [0x7fbc4fc3e4d0]
/usr/lib/libc.so.6(+0x9f002) [0x7fbc4fc9f002]
/usr/lib/libc.so.6(+0x9316c) [0x7fbc4fc9316c]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x7fbc4fce3bd2]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7fbc4fcefc57]
/usr/lib/libc.so.6(usleep+0x4a) [0x7fbc4fd1a53a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x56330ee51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x56330ee1e784]
/usr/lib/libc.so.6(+0x27635) [0x7fbc4fc27635]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x7fbc4fc276e9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x56330ee1aa3a]

Exiting...
05:26:57 (1348): wrapper (7.17.26016): starting
05:26:57 (1348): wrapper (7.17.26016): starting
05:26:57 (1348): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:50:36 (1348): cmdock exited; CPU time 15042.383088
18:50:36 (1348): called boinc_finish(0)

</stderr_txt>
]]>


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