Task 98617302

Name ebola_RdRp_v1_sidock_00409775_r2_s-24.0_0
Workunit 69181114
Created 11 Jan 2026, 17:44:45 UTC
Sent 13 Jan 2026, 4:24:01 UTC
Report deadline 17 Jan 2026, 4:24:01 UTC
Received 15 Jan 2026, 5:50:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 70402
Run time 11 hours 3 min 50 sec
CPU time 11 hours 1 min
Validate state Valid
Credit 495.52
Device peak FLOPS 5.98 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.86 MB
Peak swap size 246.95 MB
Peak disk usage 20.17 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:39:00 (238492): wrapper (7.17.26016): starting
05:39:00 (238492): wrapper (7.17.26016): starting
05:39:00 (238492): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55e34e63ff8c]
/usr/lib/libc.so.6(+0x3e4d0) [0x7fccdb23e4d0]
/usr/lib/libc.so.6(+0x9890c) [0x7fccdb29890c]
/usr/lib/libc.so.6(gsignal+0x20) [0x7fccdb23e3a0]
/usr/lib/libc.so.6(abort+0x26) [0x7fccdb22557a]
/usr/lib/libc.so.6(+0x26613) [0x7fccdb226613]
/usr/lib/libc.so.6(+0xa2d25) [0x7fccdb2a2d25]
/usr/lib/libc.so.6(+0xa2d44) [0x7fccdb2a2d44]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55e34e65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55e34e67b8e4]
/usr/lib/libc.so.6(+0x3e4d0) [0x7fccdb23e4d0]
/usr/lib/libc.so.6(+0x9f002) [0x7fccdb29f002]
/usr/lib/libc.so.6(+0x9316c) [0x7fccdb29316c]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x7fccdb2e3bd2]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7fccdb2efc57]
/usr/lib/libc.so.6(usleep+0x4a) [0x7fccdb31a53a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55e34e651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55e34e61e784]
/usr/lib/libc.so.6(+0x27635) [0x7fccdb227635]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x7fccdb2276e9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55e34e61aa3a]

Exiting...
05:26:57 (1343): wrapper (7.17.26016): starting
05:26:57 (1343): wrapper (7.17.26016): starting
05:26:57 (1343): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:50:29 (1343): cmdock exited; CPU time 2968.048293
06:50:29 (1343): called boinc_finish(0)

</stderr_txt>
]]>


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