Task 98548292

Name ebola_RdRp_v1_sidock_00394102_r1_s-24.0_0
Workunit 69118421
Created 8 Jan 2026, 15:22:27 UTC
Sent 10 Jan 2026, 15:15:05 UTC
Report deadline 14 Jan 2026, 15:15:05 UTC
Received 16 Jan 2026, 1:53:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 81442
Run time 9 hours 31 min 16 sec
CPU time 9 hours 22 min 57 sec
Validate state Valid
Credit 831.05
Device peak FLOPS 5.32 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.47 MB
Peak swap size 247.91 MB
Peak disk usage 20.27 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:20:25 (341513): wrapper (7.17.26016): starting
15:20:25 (341513): wrapper (7.17.26016): starting
15:20:25 (341513): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid size
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x56048ba3ff8c]
/lib64/libc.so.6(+0x1a290) [0x7fbdf9360290]
/lib64/libc.so.6(+0x743cc) [0x7fbdf93ba3cc]
/lib64/libc.so.6(gsignal+0x1e) [0x7fbdf936015e]
/lib64/libc.so.6(abort+0x26) [0x7fbdf93476d0]
/lib64/libc.so.6(+0x273b) [0x7fbdf934873b]
/lib64/libc.so.6(+0x7e665) [0x7fbdf93c4665]
/lib64/libc.so.6(+0x7e684) [0x7fbdf93c4684]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x56048ba5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x56048ba7b8e4]
/lib64/libc.so.6(+0x1a290) [0x7fbdf9360290]
/lib64/libc.so.6(+0x7a982) [0x7fbdf93c0982]
/lib64/libc.so.6(+0x6ec3c) [0x7fbdf93b4c3c]
/lib64/libc.so.6(clock_nanosleep+0x32) [0x7fbdf9404b62]
/lib64/libc.so.6(nanosleep+0x17) [0x7fbdf9410b37]
/lib64/libc.so.6(usleep+0x4a) [0x7fbdf943b13a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x56048ba51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x56048ba1e784]
/lib64/libc.so.6(+0x35b5) [0x7fbdf93495b5]
/lib64/libc.so.6(__libc_start_main+0x88) [0x7fbdf9349668]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x56048ba1aa3a]

Exiting...
21:33:58 (29930): wrapper (7.17.26016): starting
21:33:58 (29930): wrapper (7.17.26016): starting
21:33:58 (29930): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:36:55 (21286): wrapper (7.17.26016): starting
19:36:55 (21286): wrapper (7.17.26016): starting
19:36:55 (21286): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:15:56 (52258): wrapper (7.17.26016): starting
21:15:56 (52258): wrapper (7.17.26016): starting
21:15:56 (52258): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:53:51 (52258): cmdock exited; CPU time 16961.217758
02:53:51 (52258): called boinc_finish(0)

</stderr_txt>
]]>


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