Task 98508208

Name ebola_RdRp_v1_sidock_00384095_r2_s-24.0_0
Workunit 69078394
Created 8 Jan 2026, 14:45:11 UTC
Sent 9 Jan 2026, 4:55:38 UTC
Report deadline 13 Jan 2026, 4:55:38 UTC
Received 11 Jan 2026, 16:14:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60230
Run time 4 hours 48 min 2 sec
CPU time 4 hours 48 min 2 sec
Validate state Valid
Credit 528.95
Device peak FLOPS 11.20 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.58 MB
Peak swap size 248.09 MB
Peak disk usage 20.06 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:06:20 (806070): wrapper (7.17.26016): starting
08:06:21 (806070): wrapper (7.17.26016): starting
08:06:21 (806070): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/run/media/boinc/GAMY/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid size
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55b9efe3ff8c]
/usr/lib/libc.so.6(+0x44aa0) [0x7f5f8c844aa0]
/usr/lib/libc.so.6(pthread_kill+0x12b) [0x7f5f8c8ac56b]
/usr/lib/libc.so.6(gsignal+0x18) [0x7f5f8c844968]
/usr/lib/libc.so.6(abort+0x27) [0x7f5f8c82560f]
/usr/lib/libc.so.6(+0x26876) [0x7f5f8c826876]
/usr/lib/libc.so.6(+0xb73e7) [0x7f5f8c8b73e7]
/usr/lib/libc.so.6(+0xb7401) [0x7f5f8c8b7401]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55b9efe5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55b9efe7b8e4]
/usr/lib/libc.so.6(+0x44aa0) [0x7f5f8c844aa0]
/usr/lib/libc.so.6(+0xb2e62) [0x7f5f8c8b2e62]
/usr/lib/libc.so.6(+0xa644f) [0x7f5f8c8a644f]
/usr/lib/libc.so.6(clock_nanosleep+0x2e) [0x7f5f8c8fb87e]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7f5f8c90baf7]
/usr/lib/libc.so.6(usleep+0x4b) [0x7f5f8c940e9b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55b9efe51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55b9efe1e784]
/usr/lib/libc.so.6(+0x27b0b) [0x7f5f8c827b0b]
/usr/lib/libc.so.6(__libc_start_main+0x8b) [0x7f5f8c827bbb]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55b9efe1aa3a]

Exiting...
11:40:06 (314277): wrapper (7.17.26016): starting
11:40:06 (314277): wrapper (7.17.26016): starting
11:40:06 (314277): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/run/media/boinc/GAMY/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:14:36 (314277): cmdock exited; CPU time 15785.310580
17:14:36 (314277): called boinc_finish(0)

</stderr_txt>
]]>


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