Task 98481289

Name ebola_RdRp_v1_sidock_00379267_r2_s-24.0_0
Workunit 69059082
Created 5 Jan 2026, 15:27:22 UTC
Sent 8 Jan 2026, 7:49:44 UTC
Report deadline 12 Jan 2026, 7:49:44 UTC
Received 9 Jan 2026, 1:01:25 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 82041
Run time 11 hours 22 min 26 sec
CPU time 11 hours 9 min 17 sec
Validate state Valid
Credit 556.31
Device peak FLOPS 3.55 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.04 MB
Peak swap size 247.19 MB
Peak disk usage 20.14 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:45:05 (5912): wrapper (7.17.26016): starting
20:45:05 (5912): wrapper (7.17.26016): starting
20:45:05 (5912): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56e00ec3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7da6d5c45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7da6d5cadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56e00ec5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56e00ec7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7da6d5c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7da6d5cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7da6d5cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7da6d5d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56e00ec51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56e00ec1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7da6d5c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7da6d5c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56e00ec1aa3a]

Exiting...
21:29:35 (1431): wrapper (7.17.26016): starting
21:29:35 (1431): wrapper (7.17.26016): starting
21:29:35 (1431): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:45:56 (1433): wrapper (7.17.26016): starting
22:45:56 (1433): wrapper (7.17.26016): starting
22:45:56 (1433): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:48:43 (1450): wrapper (7.17.26016): starting
22:48:43 (1450): wrapper (7.17.26016): starting
22:48:43 (1450): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:01:13 (1450): cmdock exited; CPU time 37901.105611
10:01:13 (1450): called boinc_finish(0)

</stderr_txt>
]]>


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