Task 98469854

Name ebola_RdRp_v1_sidock_00376406_r3_s-24.0_0
Workunit 69047639
Created 5 Jan 2026, 15:17:20 UTC
Sent 7 Jan 2026, 22:51:22 UTC
Report deadline 11 Jan 2026, 22:51:22 UTC
Received 7 Jan 2026, 23:35:04 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 82115
Run time 32 sec
CPU time 30 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 34.19 MB
Peak swap size 41.40 MB
Peak disk usage 20.13 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
23:25:48 (2547): wrapper (7.17.26016): starting
23:25:49 (2547): wrapper (7.17.26016): starting
23:25:49 (2547): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55d83b03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f671f22a050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8aeec)[0x7f671f278eec]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7f671f229fb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f671f214472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f42f)[0x7f671f26d42f]
/lib/x86_64-linux-gnu/libc.so.6(+0x9486a)[0x7f671f28286a]
/lib/x86_64-linux-gnu/libc.so.6(+0x965f4)[0x7f671f2845f4]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7f671f286f4f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55d83b05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55d83b07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f671f22a050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f671f2bd545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f671f2c1e53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f671f2ed245]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55d83b051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55d83b01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7f671f21524a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f671f215305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55d83b01aa3a]

Exiting...
23:31:47 (2218): wrapper (7.17.26016): starting
23:31:47 (2218): wrapper (7.17.26016): starting
23:31:47 (2218): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:32:18 (2218): cmdock exited; CPU time 30.576516
23:32:18 (2218): called boinc_finish(0)

</stderr_txt>
]]>


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