Task 98468107

Name ebola_RdRp_v1_sidock_00375982_r3_s-24.0_0
Workunit 69045943
Created 5 Jan 2026, 15:15:51 UTC
Sent 7 Jan 2026, 21:24:59 UTC
Report deadline 11 Jan 2026, 21:24:59 UTC
Received 9 Jan 2026, 1:21:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 82041
Run time 20 hours 9 min 20 sec
CPU time 19 hours 49 min 49 sec
Validate state Valid
Credit 977.31
Device peak FLOPS 3.55 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.48 MB
Peak swap size 247.62 MB
Peak disk usage 20.39 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:01:32 (25132): wrapper (7.17.26016): starting
12:01:32 (25132): wrapper (7.17.26016): starting
12:01:32 (25132): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x63311f63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x702509c45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x702509cadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x63311f65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x63311f67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x702509c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x702509cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x702509cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x702509d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x63311f651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x63311f61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x702509c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x702509c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x63311f61aa3a]

Exiting...
19:57:21 (1490): wrapper (7.17.26016): starting
19:57:21 (1490): wrapper (7.17.26016): starting
19:57:21 (1490): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:58:09 (1495): wrapper (7.17.26016): starting
19:58:09 (1495): wrapper (7.17.26016): starting
19:58:09 (1495): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:58:59 (1457): wrapper (7.17.26016): starting
19:58:59 (1457): wrapper (7.17.26016): starting
19:58:59 (1457): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:29:35 (1428): wrapper (7.17.26016): starting
21:29:35 (1428): wrapper (7.17.26016): starting
21:29:35 (1428): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:45:56 (1430): wrapper (7.17.26016): starting
22:45:56 (1430): wrapper (7.17.26016): starting
22:45:56 (1430): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:48:43 (1447): wrapper (7.17.26016): starting
22:48:43 (1447): wrapper (7.17.26016): starting
22:48:43 (1447): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:21:18 (1447): cmdock exited; CPU time 39093.630631
10:21:18 (1447): called boinc_finish(0)

</stderr_txt>
]]>


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