Task 98459100

Name	ebola_RdRp_v1_sidock_00373727_r1_s-24.0_0
Workunit	69036921
Created	5 Jan 2026, 15:07:57 UTC
Sent	7 Jan 2026, 14:31:31 UTC
Report deadline	11 Jan 2026, 14:31:31 UTC
Received	7 Jan 2026, 23:36:33 UTC
Server state	Over
Outcome	Validate error
Client state	Done
Exit status	0 (0x00000000)
Computer ID	81587
Run time	5 hours 38 min 15 sec
CPU time	5 hours 36 min 54 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.99 MB
Peak swap size	247.06 MB
Peak disk usage	20.03 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
16:36:47 (97623): wrapper (7.17.26016): starting
16:36:47 (97623): wrapper (7.17.26016): starting
16:36:47 (97623): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/41/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:16:58 (98153): wrapper (7.17.26016): starting
20:16:58 (98153): wrapper (7.17.26016): starting
20:16:58 (98153): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/41/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55bd0923ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f7cae412050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8aeec)[0x7f7cae460eec]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7f7cae411fb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f7cae3fc472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f42f)[0x7f7cae45542f]
/lib/x86_64-linux-gnu/libc.so.6(+0x9486a)[0x7f7cae46a86a]
/lib/x86_64-linux-gnu/libc.so.6(+0x965f4)[0x7f7cae46c5f4]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7f7cae46ef4f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55bd0925c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55bd0927b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f7cae412050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f7cae4a5545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f7cae4a9e53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f7cae4d5245]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55bd09251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55bd0921e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7f7cae3fd24a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f7cae3fd305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55bd0921aa3a]

Exiting...
23:25:32 (2479): wrapper (7.17.26016): starting
23:25:33 (2479): wrapper (7.17.26016): starting
23:25:33 (2479): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/41/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5646e7a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fea9fbf4050]
/lib/x86_64-linux-gnu/libc.so.6(+0x8aeec)[0x7fea9fc42eec]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12)[0x7fea9fbf3fb2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fea9fbde472]
/lib/x86_64-linux-gnu/libc.so.6(+0x7f42f)[0x7fea9fc3742f]
/lib/x86_64-linux-gnu/libc.so.6(+0x9486a)[0x7fea9fc4c86a]
/lib/x86_64-linux-gnu/libc.so.6(+0x965f4)[0x7fea9fc4e5f4]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x6f)[0x7fea9fc50f4f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5646e7a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5646e7a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fea9fbf4050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7fea9fc87545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7fea9fc8be53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7fea9fcb7245]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5646e7a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5646e7a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7fea9fbdf24a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7fea9fbdf305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5646e7a1aa3a]

Exiting...
23:32:13 (2238): wrapper (7.17.26016): starting
23:32:13 (2238): wrapper (7.17.26016): starting
23:32:13 (2238): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/41/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:33:02 (2238): cmdock exited; CPU time 47.775907
23:33:02 (2238): called boinc_finish(0)

</stderr_txt>
]]>