Task 98388787

Name ebola_RdRp_v1_sidock_00357975_r2_s-24.0_0
Workunit 68973914
Created 2 Jan 2026, 14:42:54 UTC
Sent 5 Jan 2026, 4:19:26 UTC
Report deadline 9 Jan 2026, 4:19:26 UTC
Received 12 Jan 2026, 4:04:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 65886
Run time 18 hours 8 min 25 sec
CPU time 18 hours 6 min 13 sec
Validate state Valid
Credit 578.86
Device peak FLOPS 4.43 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 236.46 MB
Peak swap size 247.57 MB
Peak disk usage 20.45 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:27:30 (2933347): wrapper (7.17.26016): starting
05:27:30 (2933347): wrapper (7.17.26016): starting
05:27:30 (2933347): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x64c6e523ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x767f3a99ddf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x767f3a9f295c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x767f3a99dcc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x767f3a9864ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x767f3a987291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x767f3a9fc465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x767f3aa013dc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x64c6e525c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x64c6e527b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x767f3a99ddf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x767f3a9f89ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x767f3a9ed668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x767f3aa39f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x767f3aa45393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x767f3aa6e373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x64c6e5251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x64c6e521e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x767f3a987ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x767f3a987d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x64c6e521aa3a]

Exiting...
01:00:02 (141768): wrapper (7.17.26016): starting
01:00:04 (141768): wrapper (7.17.26016): starting
01:00:04 (141768): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:04:36 (141768): cmdock exited; CPU time 47432.328803
05:04:36 (141768): called boinc_finish(0)

</stderr_txt>
]]>


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