Task 98150326

Name ebola_RdRp_v1_sidock_00301255_r3_s-24.0_0
Workunit 68747035
Created 26 Dec 2025, 8:34:42 UTC
Sent 26 Dec 2025, 17:03:11 UTC
Report deadline 30 Dec 2025, 17:03:11 UTC
Received 27 Dec 2025, 6:46:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 7 hours 26 min 56 sec
CPU time 7 hours 26 min 48 sec
Validate state Valid
Credit 484.28
Device peak FLOPS 9.72 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.99 MB
Peak swap size 245.99 MB
Peak disk usage 20.28 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:03:28 (3582): wrapper (7.17.26016): starting
11:03:29 (3582): wrapper (7.17.26016): starting
11:03:29 (3582): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c1f5803ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x716949245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x71694929eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x71694924527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7169492288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7169492297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7169492a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7169492ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7169492addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c1f5805c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c1f5807b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x716949245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7169492ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7169492f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71694932975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c1f58051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c1f5801e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71694922a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71694922a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c1f5801aa3a]

Exiting...
21:18:37 (1976): wrapper (7.17.26016): starting
21:18:37 (1976): wrapper (7.17.26016): starting
21:18:37 (1976): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:46:24 (1976): cmdock exited; CPU time 12081.898683
00:46:24 (1976): called boinc_finish(0)

</stderr_txt>
]]>


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