Task 98146211

Name ebola_RdRp_v1_sidock_00300223_r1_s-24.0_0
Workunit 68742905
Created 26 Dec 2025, 8:30:52 UTC
Sent 26 Dec 2025, 10:59:07 UTC
Report deadline 30 Dec 2025, 10:59:07 UTC
Received 27 Dec 2025, 6:05:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 7 hours 52 min 27 sec
CPU time 7 hours 52 min 19 sec
Validate state Valid
Credit 515.02
Device peak FLOPS 9.72 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.04 MB
Peak swap size 245.80 MB
Peak disk usage 20.22 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:11:50 (148588): wrapper (7.17.26016): starting
05:11:50 (148588): wrapper (7.17.26016): starting
05:11:50 (148588): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6257df43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7adec5e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7adec5e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7adec5e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7adec5e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7adec5e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7adec5ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7adec5eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7adec5eaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6257df45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6257df47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7adec5e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7adec5eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7adec5ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x7adec5f0ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x6257df451a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6257df41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7adec5e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7adec5e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6257df41aa3a]

Exiting...
11:02:39 (2582): wrapper (7.17.26016): starting
11:02:39 (2582): wrapper (7.17.26016): starting
11:02:39 (2582): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:18:37 (1960): wrapper (7.17.26016): starting
21:18:37 (1960): wrapper (7.17.26016): starting
21:18:37 (1960): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:05:37 (1960): cmdock exited; CPU time 8723.235884
00:05:37 (1960): called boinc_finish(0)

</stderr_txt>
]]>


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