Task 98145581

Name ebola_RdRp_v1_sidock_00300066_r1_s-24.0_0
Workunit 68742277
Created 26 Dec 2025, 8:30:24 UTC
Sent 26 Dec 2025, 10:15:09 UTC
Report deadline 30 Dec 2025, 10:15:09 UTC
Received 27 Dec 2025, 7:03:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 78592
Run time 10 hours 17 min 28 sec
CPU time 10 hours 17 min 14 sec
Validate state Valid
Credit 484.12
Device peak FLOPS 8.09 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.60 MB
Peak swap size 248.02 MB
Peak disk usage 20.26 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:29:50 (150074): wrapper (7.17.26016): starting
04:29:50 (150074): wrapper (7.17.26016): starting
04:29:50 (150074): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5846bf63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75c76f445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75c76f49eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75c76f44527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x75c76f4288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x75c76f4297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x75c76f4a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x75c76f4ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x75c76f4addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5846bf65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5846bf67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75c76f445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75c76f4ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75c76f4f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75c76f52975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5846bf651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5846bf61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75c76f42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75c76f42a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5846bf61aa3a]

Exiting...
10:50:17 (2529): wrapper (7.17.26016): starting
10:50:17 (2529): wrapper (7.17.26016): starting
10:50:17 (2529): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (88824): wrapper (7.17.26016): starting
21:00:02 (88824): wrapper (7.17.26016): starting
21:00:02 (88824): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:03:41 (88824): cmdock exited; CPU time 14550.050769
01:03:41 (88824): called boinc_finish(0)

</stderr_txt>
]]>


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