Task 98144886

Name	ebola_RdRp_v1_sidock_00286240_r3_s-24.0_1
Workunit	68686975
Created	26 Dec 2025, 1:55:18 UTC
Sent	26 Dec 2025, 9:17:27 UTC
Report deadline	30 Dec 2025, 9:17:27 UTC
Received	27 Dec 2025, 7:58:55 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54585
Run time	10 hours 4 min 20 sec
CPU time	10 hours 4 min 10 sec
Validate state	Valid
Credit	471.65
Device peak FLOPS	8.51 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.71 MB
Peak swap size	247.22 MB
Peak disk usage	20.25 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:18:40 (1390721): wrapper (7.17.26016): starting
04:18:40 (1390721): wrapper (7.17.26016): starting
04:18:40 (1390721): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55e53163ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7df96cc45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7df96cc9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7df96cc4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7df96cc288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7df96cc297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7df96cca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7df96ccab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7df96ccaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55e53165c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55e53167b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7df96cc45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7df96ccecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7df96ccf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7df96cd2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55e531651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55e53161e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7df96cc2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7df96cc2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55e53161aa3a]

Exiting...
10:00:02 (1438346): wrapper (7.17.26016): starting
10:00:03 (1438346): wrapper (7.17.26016): starting
10:00:03 (1438346): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d223ec3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x748057245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x74805729eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x74805724527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7480572288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7480572297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7480572a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7480572ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7480572addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d223ec5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d223ec7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x748057245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7480572ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7480572f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x74805732975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d223ec51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d223ec1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x74805722a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x74805722a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d223ec1aa3a]

Exiting...
21:00:02 (1526205): wrapper (7.17.26016): starting
21:00:02 (1526205): wrapper (7.17.26016): starting
21:00:02 (1526205): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:58:40 (1526205): cmdock exited; CPU time 16103.026860
01:58:40 (1526205): called boinc_finish(0)

</stderr_txt>
]]>