Task 98144642

Name ebola_RdRp_v1_sidock_00285993_r1_s-24.0_1
Workunit 68685985
Created 26 Dec 2025, 0:46:50 UTC
Sent 26 Dec 2025, 8:55:59 UTC
Report deadline 30 Dec 2025, 8:55:59 UTC
Received 26 Dec 2025, 17:03:09 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 3 hours 21 min 45 sec
CPU time 3 hours 21 min 45 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.72 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.90 MB
Peak swap size 245.79 MB
Peak disk usage 19.99 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:08:14 (129981): wrapper (7.17.26016): starting
03:08:15 (129981): wrapper (7.17.26016): starting
03:08:15 (129981): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x597bfc23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7ccf70a45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7ccf70a9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7ccf70a4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7ccf70a288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7ccf70a297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7ccf70aa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7ccf70aab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7ccf70aaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x597bfc25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x597bfc27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7ccf70a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7ccf70aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7ccf70af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7ccf70b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x597bfc251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x597bfc21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7ccf70a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7ccf70a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x597bfc21aa3a]

Exiting...
11:00:29 (2516): wrapper (7.17.26016): starting
11:00:29 (2516): wrapper (7.17.26016): starting
11:00:29 (2516): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:02:34 (1983): wrapper (7.17.26016): starting
11:02:34 (1983): wrapper (7.17.26016): starting
11:02:34 (1983): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/17/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:02:37 (1983): cmdock exited; CPU time 2.457265
11:02:37 (1983): called boinc_finish(0)

</stderr_txt>
]]>


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