Task 98144638

Name ebola_RdRp_v1_sidock_00285971_r1_s-24.0_1
Workunit 68685897
Created 26 Dec 2025, 0:46:49 UTC
Sent 26 Dec 2025, 8:55:59 UTC
Report deadline 30 Dec 2025, 8:55:59 UTC
Received 26 Dec 2025, 17:03:09 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 3 hours 24 min 50 sec
CPU time 3 hours 24 min 50 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.72 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.91 MB
Peak swap size 247.93 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:10:57 (130321): wrapper (7.17.26016): starting
03:10:57 (130321): wrapper (7.17.26016): starting
03:10:57 (130321): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5e2de423ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76f6f5645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x76f6f569eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x76f6f564527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x76f6f56288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x76f6f56297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x76f6f56a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x76f6f56ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x76f6f56addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5e2de425c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5e2de427b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76f6f5645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76f6f56ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76f6f56f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76f6f572975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5e2de4251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5e2de421e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76f6f562a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76f6f562a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5e2de421aa3a]

Exiting...
11:00:29 (2517): wrapper (7.17.26016): starting
11:00:29 (2517): wrapper (7.17.26016): starting
11:00:29 (2517): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:02:34 (1984): wrapper (7.17.26016): starting
11:02:34 (1984): wrapper (7.17.26016): starting
11:02:34 (1984): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:02:37 (1984): cmdock exited; CPU time 2.642738
11:02:37 (1984): called boinc_finish(0)

</stderr_txt>
]]>


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