Task 98134121

Name	ebola_RdRp_v1_sidock_00282809_r1_s-24.0_1
Workunit	68673249
Created	21 Dec 2025, 16:45:10 UTC
Sent	25 Dec 2025, 21:06:26 UTC
Report deadline	29 Dec 2025, 21:06:26 UTC
Received	27 Dec 2025, 3:38:04 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54585
Run time	9 hours 46 min 58 sec
CPU time	9 hours 46 min 51 sec
Validate state	Valid
Credit	462.77
Device peak FLOPS	8.51 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.75 MB
Peak swap size	247.74 MB
Peak disk usage	20.03 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:00:02 (1329684): wrapper (7.17.26016): starting
21:00:02 (1329684): wrapper (7.17.26016): starting
21:00:02 (1329684): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56785263ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79d972645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x79d97269eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x79d97264527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x79d9726288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x79d9726297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x79d9726a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x79d9726ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x79d9726addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56785265c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56785267b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x79d972645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x79d9726ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x79d9726f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x79d97272975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x567852651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56785261e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79d97262a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79d97262a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56785261aa3a]

Exiting...
10:00:02 (1438340): wrapper (7.17.26016): starting
10:00:03 (1438340): wrapper (7.17.26016): starting
10:00:03 (1438340): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6262a7e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7abb5de45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7abb5de9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7abb5de4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7abb5de288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7abb5de297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7abb5dea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7abb5deab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7abb5deaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6262a7e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6262a7e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7abb5de45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7abb5deecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7abb5def9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7abb5df2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6262a7e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6262a7e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7abb5de2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7abb5de2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6262a7e1aa3a]

Exiting...
21:00:02 (1526203): wrapper (7.17.26016): starting
21:00:02 (1526203): wrapper (7.17.26016): starting
21:00:02 (1526203): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:37:39 (1526203): cmdock exited; CPU time 2255.908182
21:37:39 (1526203): called boinc_finish(0)

</stderr_txt>
]]>