Task 98128548

Name	ebola_RdRp_v1_sidock_00299048_r1_s-24.0_0
Workunit	68738205
Created	20 Dec 2025, 20:46:33 UTC
Sent	25 Dec 2025, 12:31:56 UTC
Report deadline	29 Dec 2025, 12:31:56 UTC
Received	27 Dec 2025, 7:35:32 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	7 hours 52 min 1 sec
CPU time	7 hours 51 min 49 sec
Validate state	Valid
Credit	498.44
Device peak FLOPS	9.82 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.94 MB
Peak swap size	247.84 MB
Peak disk usage	20.35 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:53:05 (106246): wrapper (7.17.26016): starting
06:53:05 (106246): wrapper (7.17.26016): starting
06:53:05 (106246): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62213783ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b8fff445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7b8fff49eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7b8fff44527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7b8fff4288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7b8fff4297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7b8fff4a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7b8fff4ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7b8fff4addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62213785c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62213787b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b8fff445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b8fff4ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b8fff4f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b8fff52975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x622137851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62213781e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b8fff42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b8fff42a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62213781aa3a]

Exiting...
11:57:57 (6758): wrapper (7.17.26016): starting
11:57:57 (6758): wrapper (7.17.26016): starting
11:57:57 (6758): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:58:34 (2725): wrapper (7.17.26016): starting
10:58:34 (2725): wrapper (7.17.26016): starting
10:58:34 (2725): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x58ba3863ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7adf57045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7adf5709eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7adf5704527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7adf570288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7adf570297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7adf570a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7adf570ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7adf570addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x58ba3865c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x58ba3867b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7adf57045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7adf570ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7adf570f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7adf5712975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x58ba38651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x58ba3861e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7adf5702a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7adf5702a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x58ba3861aa3a]

Exiting...
21:00:02 (81212): wrapper (7.17.26016): starting
21:00:02 (81212): wrapper (7.17.26016): starting
21:00:02 (81212): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:35:16 (81212): cmdock exited; CPU time 15644.334130
01:35:16 (81212): called boinc_finish(0)

</stderr_txt>
]]>