Task 98128014

Name	ebola_RdRp_v1_sidock_00298918_r2_s-24.0_0
Workunit	68737686
Created	20 Dec 2025, 20:46:05 UTC
Sent	25 Dec 2025, 11:35:28 UTC
Report deadline	29 Dec 2025, 11:35:28 UTC
Received	27 Dec 2025, 4:44:56 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54582
Run time	11 hours 48 min 4 sec
CPU time	11 hours 47 min 46 sec
Validate state	Valid
Credit	524.97
Device peak FLOPS	8.41 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.09 MB
Peak swap size	246.25 MB
Peak disk usage	20.23 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:38:01 (1441989): wrapper (7.17.26016): starting
05:38:01 (1441989): wrapper (7.17.26016): starting
05:38:01 (1441989): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56d5aa03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x753b68845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x753b6889eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x753b6884527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x753b688288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x753b688297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x753b688a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x753b688ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x753b688addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56d5aa05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56d5aa07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x753b68845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x753b688ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x753b688f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x753b6892975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56d5aa051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56d5aa01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x753b6882a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x753b6882a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56d5aa01aa3a]

Exiting...
21:00:03 (1579283): wrapper (7.17.26016): starting
21:00:03 (1579283): wrapper (7.17.26016): starting
21:00:03 (1579283): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5fca0263ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d772e445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7d772e49eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7d772e44527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7d772e4288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7d772e4297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7d772e4a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7d772e4ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7d772e4addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5fca0265c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5fca0267b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d772e445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d772e4ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d772e4f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d772e52975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5fca02651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5fca0261e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d772e42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d772e42a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5fca0261aa3a]

Exiting...
21:00:02 (1794124): wrapper (7.17.26016): starting
21:00:03 (1794124): wrapper (7.17.26016): starting
21:00:03 (1794124): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/19/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:44:44 (1794124): cmdock exited; CPU time 6278.966659
22:44:44 (1794124): called boinc_finish(0)

</stderr_txt>
]]>