Task 98127579

Name	ebola_RdRp_v1_sidock_00298806_r3_s-24.0_0
Workunit	68737239
Created	20 Dec 2025, 20:45:41 UTC
Sent	25 Dec 2025, 10:44:22 UTC
Report deadline	29 Dec 2025, 10:44:22 UTC
Received	27 Dec 2025, 6:39:23 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	8 hours 18 min 45 sec
CPU time	8 hours 18 min 34 sec
Validate state	Valid
Credit	519.81
Device peak FLOPS	9.82 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.43 MB
Peak swap size	247.65 MB
Peak disk usage	20.40 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:36:38 (94949): wrapper (7.17.26016): starting
05:36:38 (94949): wrapper (7.17.26016): starting
05:36:38 (94949): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x60ec9683ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x729316445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72931649eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72931644527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7293164288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7293164297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7293164a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7293164ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7293164addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x60ec9685c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x60ec9687b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x729316445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7293164ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7293164f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72931652975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x60ec96851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x60ec9681e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72931642a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72931642a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x60ec9681aa3a]

Exiting...
11:31:11 (2687): wrapper (7.17.26016): starting
11:31:11 (2687): wrapper (7.17.26016): starting
11:31:11 (2687): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:58:34 (2717): wrapper (7.17.26016): starting
10:58:34 (2717): wrapper (7.17.26016): starting
10:58:34 (2717): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6441b003ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72b585045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72b58509eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72b58504527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72b5850288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72b5850297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x72b5850a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x72b5850ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72b5850addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6441b005c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6441b007b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72b585045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72b5850ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72b5850f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72b58512975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6441b0051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6441b001e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72b58502a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72b58502a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6441b001aa3a]

Exiting...
21:00:02 (81208): wrapper (7.17.26016): starting
21:00:02 (81208): wrapper (7.17.26016): starting
21:00:02 (81208): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:39:07 (81208): cmdock exited; CPU time 12903.556192
00:39:07 (81208): called boinc_finish(0)

</stderr_txt>
]]>