Task 98127164

Name	ebola_RdRp_v1_sidock_00298690_r4_s-24.0_0
Workunit	68736776
Created	20 Dec 2025, 20:45:18 UTC
Sent	25 Dec 2025, 10:08:52 UTC
Report deadline	29 Dec 2025, 10:08:52 UTC
Received	27 Dec 2025, 4:37:02 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	7 hours 57 min 51 sec
CPU time	7 hours 57 min 41 sec
Validate state	Valid
Credit	507.74
Device peak FLOPS	9.82 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.63 MB
Peak swap size	246.39 MB
Peak disk usage	20.37 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:06:14 (90647): wrapper (7.17.26016): starting
05:06:14 (90647): wrapper (7.17.26016): starting
05:06:14 (90647): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x649d9903ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fddee445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7fddee49eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7fddee44527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7fddee4288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7fddee4297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7fddee4a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7fddee4ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7fddee4addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x649d9905c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x649d9907b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fddee445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7fddee4ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fddee4f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7fddee52975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x649d99051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x649d9901e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7fddee42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7fddee42a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x649d9901aa3a]

Exiting...
11:31:11 (2686): wrapper (7.17.26016): starting
11:31:11 (2686): wrapper (7.17.26016): starting
11:31:11 (2686): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:58:34 (2716): wrapper (7.17.26016): starting
10:58:34 (2716): wrapper (7.17.26016): starting
10:58:34 (2716): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5b39b063ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73eddaa45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x73eddaa9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x73eddaa4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x73eddaa288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x73eddaa297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x73eddaaa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x73eddaaab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x73eddaaaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5b39b065c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5b39b067b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73eddaa45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73eddaaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73eddaaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73eddab2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5b39b0651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5b39b061e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73eddaa2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73eddaa2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5b39b061aa3a]

Exiting...
21:00:02 (81206): wrapper (7.17.26016): starting
21:00:02 (81206): wrapper (7.17.26016): starting
21:00:02 (81206): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:36:48 (81206): cmdock exited; CPU time 5803.565036
22:36:48 (81206): called boinc_finish(0)

</stderr_txt>
]]>