Task 98118439

Name ebola_RdRp_v1_sidock_00296515_r4_s-24.0_0
Workunit 68728076
Created 20 Dec 2025, 20:37:41 UTC
Sent 24 Dec 2025, 20:46:36 UTC
Report deadline 28 Dec 2025, 20:46:36 UTC
Received 25 Dec 2025, 3:00:28 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 23 min 16 sec
CPU time 23 min 7 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.72 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.60 MB
Peak swap size 246.63 MB
Peak disk usage 20.14 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:51:36 (140820): wrapper (7.17.26016): starting
14:51:36 (140820): wrapper (7.17.26016): starting
14:51:36 (140820): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x626d8b23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c7513045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7c751309eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7c751304527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7c75130288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7c75130297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7c75130a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7c75130ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7c75130addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x626d8b25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x626d8b27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c7513045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c75130ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c75130f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c751312975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x626d8b251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x626d8b21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c751302a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c751302a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x626d8b21aa3a]

Exiting...
20:37:24 (2024): wrapper (7.17.26016): starting
20:37:24 (2024): wrapper (7.17.26016): starting
20:37:24 (2024): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:03 (6424): wrapper (7.17.26016): starting
21:00:03 (6424): wrapper (7.17.26016): starting
21:00:03 (6424): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:06 (6424): cmdock exited; CPU time 2.940162
21:00:06 (6424): called boinc_finish(0)

</stderr_txt>
]]>


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