Task 98104010

Name ebola_RdRp_v1_sidock_00292913_r4_s-24.0_0
Workunit 68713668
Created 20 Dec 2025, 20:24:57 UTC
Sent 23 Dec 2025, 22:26:20 UTC
Report deadline 27 Dec 2025, 22:26:20 UTC
Received 26 Dec 2025, 8:28:38 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 81232
Run time 2 hours 12 min 30 sec
CPU time 1 hours 44 min 29 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 236.91 MB
Peak swap size 243.81 MB
Peak disk usage 20.18 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:58:59 (208702): wrapper (7.17.26016): starting
22:58:59 (208702): wrapper (7.17.26016): starting
22:58:59 (208702): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:12:10 (1844): wrapper (7.17.26016): starting
01:12:10 (1844): wrapper (7.17.26016): starting
01:12:10 (1844): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55baf223ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f1378a93df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9495c) [0x7f1378ae895c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x12) [0x7f1378a93cc2]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x22) [0x7f1378a7c4ac]
/lib/x86_64-linux-gnu/libc.so.6(+0x29291) [0x7f1378a7d291]
/lib/x86_64-linux-gnu/libc.so.6(+0x9e465) [0x7f1378af2465]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x19c) [0x7f1378af73dc]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55baf225c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55baf227b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f1378a93df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f1378aee9ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f1378ae3668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f1378b2ff7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f1378b3b393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f1378b64373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55baf2251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55baf221e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f1378a7dca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f1378a7dd65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55baf221aa3a]

Exiting...
09:28:07 (1819): wrapper (7.17.26016): starting
09:28:07 (1819): wrapper (7.17.26016): starting
09:28:07 (1819): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:28:12 (1819): cmdock exited; CPU time 4.642805
09:28:12 (1819): called boinc_finish(0)

</stderr_txt>
]]>


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