Task 98066740

Name ebola_RdRp_v1_sidock_00283611_r3_s-24.0_0
Workunit 68676459
Created 20 Dec 2025, 19:52:47 UTC
Sent 21 Dec 2025, 11:20:43 UTC
Report deadline 25 Dec 2025, 11:20:43 UTC
Received 25 Dec 2025, 11:26:25 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 81942
Run time 10 hours 21 min 33 sec
CPU time 10 hours 20 min 39 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 6.30 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.24 MB
Peak swap size 247.75 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
19:26:29 (2790387): wrapper (7.17.26016): starting
19:26:29 (2790387): wrapper (7.17.26016): starting
19:26:29 (2790387): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5dc92cc3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b7024245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7b702429eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7b702424527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7b70242288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7b70242297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7b70242a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7b70242ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7b70242addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5dc92cc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5dc92cc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b7024245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b70242ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b70242f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b702432975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5dc92cc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5dc92cc1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b702422a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b702422a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5dc92cc1aa3a]

Exiting...
00:54:29 (6584): wrapper (7.17.26016): starting
00:54:29 (6584): wrapper (7.17.26016): starting
00:54:29 (6584): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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