Task 98036947

Name ebola_RdRp_v1_sidock_00278276_r1_s-24.0_0
Workunit 68655117
Created 16 Dec 2025, 17:07:38 UTC
Sent 20 Dec 2025, 7:55:38 UTC
Report deadline 24 Dec 2025, 7:55:38 UTC
Received 20 Dec 2025, 21:12:21 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 72257
Run time 9 hours 50 min 13 sec
CPU time 9 hours 49 min 22 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 3.55 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.04 MB
Peak swap size 247.34 MB
Peak disk usage 20.23 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
03:09:19 (4051339): wrapper (7.17.26016): starting
03:09:19 (4051339): wrapper (7.17.26016): starting
03:09:19 (4051339): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x58a65c23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f1757445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7f17574add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x58a65c25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x58a65c27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f1757445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7f17574ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f17574f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7f175752975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x58a65c251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x58a65c21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f175742a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f175742a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x58a65c21aa3a]

Exiting...
15:58:46 (4056385): wrapper (7.17.26016): starting
15:58:46 (4056385): wrapper (7.17.26016): starting
15:58:46 (4056385): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:10:32 (4057126): wrapper (7.17.26016): starting
16:10:32 (4057126): wrapper (7.17.26016): starting
16:10:32 (4057126): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:12:05 (4057126): cmdock exited; CPU time 91.464170
16:12:05 (4057126): called boinc_finish(0)

</stderr_txt>
]]>


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