Task 97954432

Name ebola_RdRp_v1_sidock_00240715_r1_s-24.0_1
Workunit 68504873
Created 12 Dec 2025, 11:41:01 UTC
Sent 16 Dec 2025, 9:34:21 UTC
Report deadline 20 Dec 2025, 9:34:21 UTC
Received 17 Dec 2025, 3:00:24 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 54588
Run time 3 hours 12 min 28 sec
CPU time 3 hours 12 min 15 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.82 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.62 MB
Peak swap size 245.74 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:17:09 (127293): wrapper (7.17.26016): starting
04:17:09 (127293): wrapper (7.17.26016): starting
04:17:09 (127293): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5cde4243ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x783afa045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x783afa09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x783afa04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x783afa0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x783afa0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x783afa0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x783afa0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x783afa0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5cde4245c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5cde4247b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x783afa045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x783afa0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x783afa0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x783afa12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5cde42451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5cde4241e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x783afa02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x783afa02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5cde4241aa3a]

Exiting...
10:20:13 (175323): wrapper (7.17.26016): starting
10:20:13 (175323): wrapper (7.17.26016): starting
10:20:13 (175323): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5dea3063ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x783f03245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x783f0329eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x783f0324527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x783f032288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x783f032297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x783f032a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x783f032ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x783f032addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5dea3065c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5dea3067b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x783f03245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x783f032ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x783f032f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x783f0332975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5dea30651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5dea3061e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x783f0322a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x783f0322a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5dea3061aa3a]

Exiting...
18:46:52 (2709): wrapper (7.17.26016): starting
18:46:53 (2709): wrapper (7.17.26016): starting
18:46:53 (2709): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5aece9c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7ece2fe45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7ece2fe9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7ece2fe4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7ece2fe288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7ece2fe297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7ece2fea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7ece2feab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7ece2feaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5aece9c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5aece9c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7ece2fe45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7ece2feecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7ece2fef9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x7ece2ff0ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x5aece9c51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5aece9c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7ece2fe2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7ece2fe2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5aece9c1aa3a]

Exiting...
21:00:03 (20539): wrapper (7.17.26016): starting
21:00:03 (20539): wrapper (7.17.26016): starting
21:00:03 (20539): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:07 (20539): cmdock exited; CPU time 3.005573
21:00:07 (20539): called boinc_finish(0)

</stderr_txt>
]]>


©2025 SiDock@home Team